Searching in Phaeobacter inhibens BS107 (Phaeo)
Found 17 curated entries in PaperBLAST's database that match '4.2.1.82' as complete word(s).
These curated entries have 8 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Phaeobacter inhibens BS107, or try another query
| PGA1_c07380: dihydroxy-acid dehydratase IlvD is similar to: | PaperBLAST |
AO356_28760: Xylonate dehydratase (EC 4.2.1.82) from Pseudomonas fluorescens | 44% id, 96% cov |
Pf6N2E2_1668: Xylonate dehydratase (EC 4.2.1.82) from Pseudomonas fluorescens | 45% id, 90% cov |
xylD / A0A0H3C6H6: xylonate dehydratase monomer (EC 4.2.1.82) from Caulobacter vibrioides | 40% id, 96% cov |
| PGA1_c04540: putative d-galactonate dehydratase is similar to: | PaperBLAST |
SSO26655 / Q97VG1: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus | 34% id, 91% cov |
XAD_HALVD / D4GP40: D-xylonate dehydratase; XAD; EC 4.2.1.82 from Haloferax volcanii | 34% id, 88% cov |
| PGA1_262p01880: mandelate racemase/ muconate lactonizing enzyme-like protein is similar to: | PaperBLAST |
SSO26655 / Q97VG1: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus | 28% id, 94% cov |
XAD_HALVD / D4GP40: D-xylonate dehydratase; XAD; EC 4.2.1.82 from Haloferax volcanii | 26% id, 88% cov |
| PGA1_c28000: phosphogluconate dehydratase Edd is similar to: | PaperBLAST |
AO356_28760: Xylonate dehydratase (EC 4.2.1.82) from Pseudomonas fluorescens | 27% id, 89% cov |
YAGF_ECOLI / P77596: D-xylonate dehydratase YagF; EC 4.2.1.82 from Escherichia coli | 32% id, 75% cov |
Pf6N2E2_1668: Xylonate dehydratase (EC 4.2.1.82) from Pseudomonas fluorescens | 27% id, 88% cov |
| PGA1_c29490: dihydroxy-acid dehydratase LivD is similar to: | PaperBLAST |
YAGF_ECOLI / P77596: D-xylonate dehydratase YagF; EC 4.2.1.82 from Escherichia coli | 30% id, 78% cov |
Pf6N2E2_1668: Xylonate dehydratase (EC 4.2.1.82) from Pseudomonas fluorescens | 33% id, 56% cov |
AO356_28760: Xylonate dehydratase (EC 4.2.1.82) from Pseudomonas fluorescens | 33% id, 56% cov |
| PGA1_262p00220: putative mandelate racemase/muconate lactonizing enzyme is similar to: | PaperBLAST |
XAD_HALVD / D4GP40: D-xylonate dehydratase; XAD; EC 4.2.1.82 from Haloferax volcanii | 24% id, 83% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 3082697-3084658 (frame +2) on PGA1_c is similar to: | PaperBLAST |
YAGF_ECOLI / P77596: D-xylonate dehydratase YagF; EC 4.2.1.82 from Escherichia coli | 29% id, 90% cov |
Lawrence Berkeley National Laboratory