Searching in Phaeobacter inhibens BS107 (Phaeo)
Found 11 curated entries in PaperBLAST's database that match '4.2.1.90' as complete word(s).
These curated entries have 7 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Phaeobacter inhibens BS107, or try another query
PGA1_262p01880: mandelate racemase/ muconate lactonizing enzyme-like protein is similar to: | PaperBLAST |
lra3 / Q1NEI8: L-rhamnonate dehydratase (EC 4.2.1.90) from Sphingomonas sp. | 28% id, 82% cov |
PGA1_c04540: putative d-galactonate dehydratase is similar to: | PaperBLAST |
RHMD_POLSJ / Q12DF1: L-rhamnonate dehydratase; RhamD; EC 4.2.1.90 from Polaromonas sp. | 24% id, 85% cov |
RHMD_ECOLI / P77215: L-rhamnonate dehydratase; RhamD; EC 4.2.1.90 from Escherichia coli | 25% id, 83% cov |
A3LZU6: L-rhamnonate dehydratase (EC 4.2.1.90) from Scheffersomyces stipitis | 24% id, 84% cov |
PGA1_262p00220: putative mandelate racemase/muconate lactonizing enzyme is similar to: | PaperBLAST |
A3LZU6: L-rhamnonate dehydratase (EC 4.2.1.90) from Scheffersomyces stipitis | 25% id, 60% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory