Curated BLAST for Genomes

 

Curated BLAST

Searching in Phaeobacter inhibens BS107 (Phaeo)

Found 7 curated entries in PaperBLAST's database that match '4.3.1.1' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Phaeobacter inhibens BS107, or try another query

PGA1_c13520: fumarate hydratase class II
is similar to:
PaperBLAST

Q9LCC6: aspartate ammonia-lyase (EC 4.3.1.1) from Bacillus sp.

42% id,
98% cov

Q9HTD7: aspartate ammonia-lyase (EC 4.3.1.1) from Pseudomonas aeruginosa

41% id,
98% cov

Q0PC50: aspartate ammonia-lyase (EC 4.3.1.1) from Campylobacter jejuni

41% id,
98% cov

More...

PGA1_c18780: adenylosuccinate lyase PurB
is similar to:
PaperBLAST

Q0PC50: aspartate ammonia-lyase (EC 4.3.1.1) from Campylobacter jejuni

25% id,
59% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory