Searching in Phaeobacter inhibens BS107 (Phaeo)
Found 6 curated entries in PaperBLAST's database that match '5.1.1.5'.
These curated entries have 4 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Phaeobacter inhibens BS107, or try another query
PGA1_c17610: putative alanine racemase is similar to: | PaperBLAST |
LYSRA_THEMA / Q9X1T3: Lysine racemase; Lys racemase; Ornithine racemase; EC 5.1.1.5; EC 5.1.1.12 from Thermotoga maritima | 35% id, 99% cov |
PGA1_c17050: N-acetyl-gamma-glutamyl-phosphate reductase ArgC is similar to: | PaperBLAST |
C7ACH5: lysine racemase (EC 5.1.1.5) from uncultured bacterium | 35% id, 50% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
1780631-1781698 (frame -2) on PGA1_c is similar to: | PaperBLAST |
C7ACH5: lysine racemase (EC 5.1.1.5) from uncultured bacterium | 34% id, 55% cov |
Lawrence Berkeley National Laboratory