Curated BLAST for Genomes

 

Curated BLAST

Searching in Phaeobacter inhibens BS107 (Phaeo)

Found 11 curated entries in PaperBLAST's database that match '5.1.99.1'.

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Phaeobacter inhibens BS107, or try another query

PGA1_c24490: methylmalonyl-CoA epimerase
is similar to:
PaperBLAST

EPI_CERS4 / Q3IZP4: Ethylmalonyl-CoA/methylmalonyl-CoA epimerase; EC 5.1.99.-; EC 5.1.99.1 from Cereibacter sphaeroides

93% id,
100% cov

MCEE_HUMAN / Q96PE7: Methylmalonyl-CoA epimerase, mitochondrial; DL-methylmalonyl-CoA racemase; EC 5.1.99.1 from Homo sapiens
MCEE / Q96PE7: methylmalonyl CoA epimerase (EC 5.1.99.1) from Homo sapiens

66% id,
75% cov

GI:18042134 / Q8VQN0: methylmalonyl CoA epimerase subunit (EC 5.1.99.1) from Propionibacterium freudenreichii

36% id,
91% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory