Curated BLAST for Genomes

 

Curated BLAST

Searching in Phaeobacter inhibens BS107 (Phaeo)

Found 17 curated entries in PaperBLAST's database that match '5.3.1.7' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Phaeobacter inhibens BS107, or try another query

PGA1_c16670: putative N-acylglucosamine 2-epimerase
is similar to:
PaperBLAST

PGA1_c16670: D-mannose isomerase (EC 5.3.1.7) from Phaeobacter inhibens

100% id,
100% cov

MANI_THEFU / A0A077LPS9: D-mannose isomerase; EC 5.3.1.7 from Thermobifida fusca

44% id,
98% cov

AO356_05200: D-mannose isomerase (EC 5.3.1.7) from Pseudomonas fluorescens

40% id,
97% cov

More...

PGA1_c19450: ABC-type sugar transport system, auxiliary component
is similar to:
PaperBLAST

DLMIS_SERPR / D5MTT1: D-lyxose/D-mannose isomerase; EC 5.3.1.15; EC 5.3.1.7 from Serratia proteamaculans

44% id,
100% cov

DLMIS_ECO57 / A0A6M7H989: D-lyxose/D-mannose isomerase; EC 5.3.1.15; EC 5.3.1.7 from Escherichia coli

42% id,
100% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory