Curated BLAST for Genomes


Curated BLAST

Searching in Phaeobacter inhibens BS107 (Phaeo)

Found 22 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Phaeobacter inhibens BS107, or try another query

PGA1_c24530: aspartyl-tRNA synthetase AspS
is similar to:

PGA1_c24530: aspartyl-tRNA(Asp/Asn) synthetase (EC from Phaeobacter inhibens

100% id,
100% cov

Dshi_2633: aspartyl-tRNA(Asp/Asn) synthetase (EC from Dinoroseobacter shibae

84% id,
100% cov

CCNA_01969: aspartyl-tRNA(Asp/Asn) synthetase (EC from Caulobacter crescentus

62% id,
99% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory