Curated BLAST
Searching in Phaeobacter inhibens BS107 (Phaeo)
Found 14 curated entries in PaperBLAST's database that match '6.3.1.11' as complete word(s).
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Phaeobacter inhibens BS107, or try another query
PGA1_c11520: gamma-glutamylputrescine synthetase PuuA is similar to: | PaperBLAST |
BPHYT_RS23160: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Burkholderia phytofirmans | 51% id, 99% cov |
SO1268: Glutamate--putrescine ligase (EC 6.3.1.11) from Shewanella oneidensis | 47% id, 99% cov |
Pf1N1B4_2254: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 33% id, 100% cov |
Pf6N2E2_4509: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 33% id, 100% cov |
BWI76_RS10710: Glutamate--putrescine ligase (EC 6.3.1.11) from Klebsiella michiganensis | 34% id, 94% cov |
Psest_4288: Glutamate--putrescine ligase (EC 6.3.1.11) from Pseudomonas stutzeri | 33% id, 98% cov |
PUUA_ECOLI / P78061: Gamma-glutamylputrescine synthetase PuuA; Gamma-Glu-Put synthetase; Glutamate--putrescine ligase; EC 6.3.1.11 from Escherichia coli YcjK / b1297: glutamate-putrescine ligase (EC 6.3.1.11) from Escherichia coli puuA / P78061: glutamate-putrescine ligase (EC 6.3.1.11) from Escherichia coli | 34% id, 95% cov |
PS417_27140: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas simiae | 33% id, 95% cov |
AO353_08595: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 33% id, 95% cov |
PfGW456L13_925: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 33% id, 95% cov |
AO356_13135: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 33% id, 95% cov |
GLNA2_HALMT / I3R584: Gamma-glutamylputrescine synthetase; Gamma-Glu-Put synthetase; Glutamate--putrescine ligase; EC 6.3.1.11 from Haloferax mediterranei | 31% id, 83% cov |
More... |
PGA1_c05550: glutamine synthase-like protein is similar to: | PaperBLAST |
BPHYT_RS23160: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Burkholderia phytofirmans | 30% id, 98% cov |
GLNA2_HALMT / I3R584: Gamma-glutamylputrescine synthetase; Gamma-Glu-Put synthetase; Glutamate--putrescine ligase; EC 6.3.1.11 from Haloferax mediterranei | 29% id, 100% cov |
Psest_4288: Glutamate--putrescine ligase (EC 6.3.1.11) from Pseudomonas stutzeri | 30% id, 96% cov |
Pf1N1B4_2254: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 28% id, 100% cov |
Pf6N2E2_4509: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 28% id, 100% cov |
AO356_13135: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 28% id, 96% cov |
SO1268: Glutamate--putrescine ligase (EC 6.3.1.11) from Shewanella oneidensis | 28% id, 98% cov |
PfGW456L13_925: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 28% id, 96% cov |
BWI76_RS10710: Glutamate--putrescine ligase (EC 6.3.1.11) from Klebsiella michiganensis | 29% id, 91% cov |
AO353_08595: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 28% id, 96% cov |
PS417_27140: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas simiae | 28% id, 94% cov |
PUUA_ECOLI / P78061: Gamma-glutamylputrescine synthetase PuuA; Gamma-Glu-Put synthetase; Glutamate--putrescine ligase; EC 6.3.1.11 from Escherichia coli YcjK / b1297: glutamate-putrescine ligase (EC 6.3.1.11) from Escherichia coli puuA / P78061: glutamate-putrescine ligase (EC 6.3.1.11) from Escherichia coli | 29% id, 91% cov |
More... |
PGA1_c23340: putative glutamine synthetase is similar to: | PaperBLAST |
BPHYT_RS23160: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Burkholderia phytofirmans | 30% id, 97% cov |
Pf1N1B4_2254: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 29% id, 98% cov |
Pf6N2E2_4509: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 29% id, 92% cov |
PUUA_ECOLI / P78061: Gamma-glutamylputrescine synthetase PuuA; Gamma-Glu-Put synthetase; Glutamate--putrescine ligase; EC 6.3.1.11 from Escherichia coli YcjK / b1297: glutamate-putrescine ligase (EC 6.3.1.11) from Escherichia coli puuA / P78061: glutamate-putrescine ligase (EC 6.3.1.11) from Escherichia coli | 30% id, 90% cov |
PS417_27140: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas simiae | 29% id, 93% cov |
PfGW456L13_925: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 29% id, 93% cov |
AO356_13135: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 29% id, 93% cov |
AO353_08595: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 28% id, 93% cov |
BWI76_RS10710: Glutamate--putrescine ligase (EC 6.3.1.11) from Klebsiella michiganensis | 29% id, 90% cov |
Psest_4288: Glutamate--putrescine ligase (EC 6.3.1.11) from Pseudomonas stutzeri | 28% id, 94% cov |
GLNA2_HALMT / I3R584: Gamma-glutamylputrescine synthetase; Gamma-Glu-Put synthetase; Glutamate--putrescine ligase; EC 6.3.1.11 from Haloferax mediterranei | 28% id, 94% cov |
SO1268: Glutamate--putrescine ligase (EC 6.3.1.11) from Shewanella oneidensis | 31% id, 82% cov |
More... |
PGA1_c27180: putative glutamine synthetase is similar to: | PaperBLAST |
BPHYT_RS23160: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Burkholderia phytofirmans | 30% id, 97% cov |
Pf1N1B4_2254: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 29% id, 98% cov |
Pf6N2E2_4509: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 29% id, 92% cov |
PUUA_ECOLI / P78061: Gamma-glutamylputrescine synthetase PuuA; Gamma-Glu-Put synthetase; Glutamate--putrescine ligase; EC 6.3.1.11 from Escherichia coli YcjK / b1297: glutamate-putrescine ligase (EC 6.3.1.11) from Escherichia coli puuA / P78061: glutamate-putrescine ligase (EC 6.3.1.11) from Escherichia coli | 30% id, 90% cov |
PS417_27140: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas simiae | 29% id, 93% cov |
PfGW456L13_925: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 29% id, 93% cov |
AO356_13135: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 29% id, 93% cov |
AO353_08595: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 28% id, 93% cov |
BWI76_RS10710: Glutamate--putrescine ligase (EC 6.3.1.11) from Klebsiella michiganensis | 29% id, 90% cov |
Psest_4288: Glutamate--putrescine ligase (EC 6.3.1.11) from Pseudomonas stutzeri | 28% id, 94% cov |
GLNA2_HALMT / I3R584: Gamma-glutamylputrescine synthetase; Gamma-Glu-Put synthetase; Glutamate--putrescine ligase; EC 6.3.1.11 from Haloferax mediterranei | 28% id, 95% cov |
SO1268: Glutamate--putrescine ligase (EC 6.3.1.11) from Shewanella oneidensis | 31% id, 82% cov |
More... |
PGA1_c18720: glutamine synthetase GlnA is similar to: | PaperBLAST |
BPHYT_RS23160: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Burkholderia phytofirmans | 27% id, 86% cov |
PUUA_ECOLI / P78061: Gamma-glutamylputrescine synthetase PuuA; Gamma-Glu-Put synthetase; Glutamate--putrescine ligase; EC 6.3.1.11 from Escherichia coli YcjK / b1297: glutamate-putrescine ligase (EC 6.3.1.11) from Escherichia coli puuA / P78061: glutamate-putrescine ligase (EC 6.3.1.11) from Escherichia coli | 25% id, 91% cov |
Pf6N2E2_4509: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 33% id, 67% cov |
Pf1N1B4_2254: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 33% id, 67% cov |
SO1268: Glutamate--putrescine ligase (EC 6.3.1.11) from Shewanella oneidensis | 24% id, 90% cov |
AO356_13135: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 33% id, 62% cov |
PfGW456L13_925: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 33% id, 62% cov |
AO353_08595: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 33% id, 62% cov |
GLNA2_HALMT / I3R584: Gamma-glutamylputrescine synthetase; Gamma-Glu-Put synthetase; Glutamate--putrescine ligase; EC 6.3.1.11 from Haloferax mediterranei | 30% id, 68% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory