Curated BLAST for Genomes

 

Curated BLAST

Searching in Phaeobacter inhibens BS107 (Phaeo)

Found 117 curated entries in PaperBLAST's database that match '6.3.1.2' as complete word(s).

These curated entries have 85 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Phaeobacter inhibens BS107, or try another query

PGA1_c18720: glutamine synthetase GlnA
is similar to:
PaperBLAST

glnA: glutamate--ammonia ligase; EC 6.3.1.2 from Escherichia coli
glnA / P0A9C5: glutamine synthetase (EC 6.3.1.2) from Escherichia coli

61% id,
100% cov

GLN1B_SALTY / P0A1P6: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Salmonella typhimurium
glnA: glutamate--ammonia ligase; EC 6.3.1.2 from Salmonella enterica
P0A1P6: glutamine synthetase (EC 6.3.1.2) from Salmonella enterica

61% id,
100% cov

GLN1B_PSETA / Q3V5W6: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Pseudomonas taetrolens

59% id,
99% cov

More...

PGA1_c23340: putative glutamine synthetase
is similar to:
PaperBLAST

O33342: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis

48% id,
98% cov

GLNA_THET8 / Q5SIP0: Glutamine synthetase; GS; Glutamate--ammonia ligase; EC 6.3.1.2 from Thermus thermophilus

36% id,
85% cov

GLNA3_HALMT / I3R176: Glutamine synthetase 3; GS3; Glutamate--ammonia ligase; EC 6.3.1.2 from Haloferax mediterranei
B8ZJH0: glutamine synthetase (EC 6.3.1.2) from Haloferax mediterranei

31% id,
96% cov

More...

PGA1_c27180: putative glutamine synthetase
is similar to:
PaperBLAST

O33342: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis

48% id,
98% cov

GLNA_THET8 / Q5SIP0: Glutamine synthetase; GS; Glutamate--ammonia ligase; EC 6.3.1.2 from Thermus thermophilus

36% id,
85% cov

GLNA3_HALMT / I3R176: Glutamine synthetase 3; GS3; Glutamate--ammonia ligase; EC 6.3.1.2 from Haloferax mediterranei
B8ZJH0: glutamine synthetase (EC 6.3.1.2) from Haloferax mediterranei

31% id,
96% cov

More...

PGA1_c11520: gamma-glutamylputrescine synthetase PuuA
is similar to:
PaperBLAST

GLNA_METJA / Q60182: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Methanocaldococcus jannaschii
Q60182: glutamine synthetase (EC 6.3.1.2) from Methanocaldococcus jannaschii

31% id,
98% cov

GLNA3_HALMT / I3R176: Glutamine synthetase 3; GS3; Glutamate--ammonia ligase; EC 6.3.1.2 from Haloferax mediterranei
B8ZJH0: glutamine synthetase (EC 6.3.1.2) from Haloferax mediterranei

30% id,
97% cov

GLNA1_METMA / Q8PY99: Glutamine synthetase; GS; Glutamate--ammonia ligase; EC 6.3.1.2 from Methanosarcina mazei
Q8PY99: glutamine synthetase (EC 6.3.1.2) from Methanosarcina mazei

30% id,
98% cov

More...

PGA1_c05550: glutamine synthase-like protein
is similar to:
PaperBLAST

O33342: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis

31% id,
95% cov

F2RM17: glutamine synthetase (EC 6.3.1.2) from Haloferax mediterranei

29% id,
99% cov

P36687: glutamine synthetase (EC 6.3.1.2) from Pyrococcus woesei

30% id,
97% cov

More...

PGA1_c11540: gamma-glutamylputrescine synthetase PuuA
is similar to:
PaperBLAST

O33342: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis

32% id,
93% cov

P36687: glutamine synthetase (EC 6.3.1.2) from Pyrococcus woesei

31% id,
93% cov

P36205: glutamine synthetase (EC 6.3.1.2) from Thermotoga maritima

30% id,
95% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory