Searching in Phaeobacter inhibens BS107 (Phaeo)
Found 3 curated entries in PaperBLAST's database that match '2-deoxy-D-ribonate 3-dehydrogenase' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 17 relevant proteins in Phaeobacter inhibens BS107, or try another query
| PGA1_c08430: short chain dehydrogenase / reductase is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 45% id, 94% cov |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 42% id, 94% cov |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 41% id, 94% cov |
| PGA1_c13170: sorbitol dehydrogenase PolS is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 37% id, 96% cov |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 34% id, 97% cov |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 33% id, 96% cov |
| PGA1_c15020: D-beta-hydroxybutyrate dehydrogenase BdhA is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 33% id, 94% cov |
| PGA1_c23480: putative D-beta-hydroxybutyrate dehydrogenase is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 32% id, 94% cov |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 30% id, 94% cov |
| PGA1_c07370: putative short chain dehydrogenase is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 32% id, 95% cov |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 29% id, 99% cov |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 29% id, 95% cov |
| PGA1_c31980: short chain dehydrogenase is similar to: | PaperBLAST |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 32% id, 94% cov |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 31% id, 94% cov |
| PGA1_c27390: short-chain dehydrogenase/reductase is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 32% id, 94% cov |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 31% id, 94% cov |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 31% id, 94% cov |
| PGA1_c10000: short chain dehydrogenase / reductase is similar to: | PaperBLAST |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 31% id, 94% cov |
| PGA1_c02060: short-chain dehydrogenase / reductase is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 31% id, 93% cov |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 27% id, 93% cov |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 26% id, 93% cov |
| PGA1_c23090: putative acetoin(diacetyl) reductase is similar to: | PaperBLAST |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 30% id, 95% cov |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 29% id, 95% cov |
| PGA1_c23120: putative sorbitol dehydrogenase is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 26% id, 94% cov |
| PGA1_c15690: short chain dehydrogenase / reductase is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 32% id, 77% cov |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 24% id, 76% cov |
| PGA1_c29980: putative short chain dehydrogenase is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 25% id, 94% cov |
| PGA1_c04640: enoyl-[acyl-carrier-protein] reductase FabI is similar to: | PaperBLAST |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 23% id, 98% cov |
| PGA1_c01280: short-chain dehydrogenase/reductase is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 28% id, 81% cov |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 26% id, 71% cov |
| PGA1_c08820: putative oxidoreductase is similar to: | PaperBLAST |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 27% id, 78% cov |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 28% id, 71% cov |
| PGA1_c27580: putative short chain dehydrogenase is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 28% id, 67% cov |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 25% id, 70% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 16 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1363071-1363886 (frame -1) on PGA1_c is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 36% id, 98% cov |
Lawrence Berkeley National Laboratory