Curated BLAST for Genomes

 

Curated BLAST

Searching in Phaeobacter inhibens BS107 (Phaeo)

Found 6 curated entries in PaperBLAST's database that match '2-oxoacid:ferredoxin oxidoreductase%subunit alpha' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Phaeobacter inhibens BS107, or try another query

PGA1_c34170: 1-deoxy-D-xylulose-5-phosphate synthase Dxs
is similar to:
PaperBLAST

OFOA_SACSO / A0A0E3JT70: 2-oxoacid:ferredoxin oxidoreductase subunit alpha; OFOR; EC 1.2.7.11 from Saccharolobus solfataricus

27% id,
13% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory