Curated BLAST
Searching in Pseudomonas putida KT2440 (Putida)
Found 27 curated entries in PaperBLAST's database that match '1.1.1.3' as complete word(s).
These curated entries have 23 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Pseudomonas putida KT2440, or try another query
PP_1470: Homoserine dehydrogenase
is similar to: | PaperBLAST |
Ga0059261_2711: homoserine dehydrogenase (EC 1.1.1.3) from Sphingomonas koreensis | 45% id,
99% cov |
D8WXQ1: homoserine dehydrogenase (EC 1.1.1.3) from Bacillus methanolicus | 40% id,
99% cov |
Q56R01: homoserine dehydrogenase (EC 1.1.1.3) from Streptomyces clavuligerus | 40% id,
99% cov |
DHOM_CORGL / P08499: Homoserine dehydrogenase; HDH; EC 1.1.1.3 from Corynebacterium glutamicum
P08499: homoserine dehydrogenase (EC 1.1.1.3) from Corynebacterium glutamicum | 41% id,
96% cov |
DvMF_1412: homoserine dehydrogenase (EC 1.1.1.3) from Desulfovibrio vulgaris | 40% id,
98% cov |
P46806: homoserine dehydrogenase (EC 1.1.1.3) from Mycobacterium leprae | 39% id,
99% cov |
DHOM_BACSU / P19582: Homoserine dehydrogenase; HDH; EC 1.1.1.3 from Bacillus subtilis | 39% id,
99% cov |
DHOM_LACLC / P52985: Homoserine dehydrogenase; HDH; EC 1.1.1.3 from Lactococcus lactis | 36% id,
96% cov |
A0A0H2WVX4: homoserine dehydrogenase (EC 1.1.1.3) from Staphylococcus aureus | 40% id,
79% cov |
D8WXQ2: homoserine dehydrogenase (EC 1.1.1.3) from Bacillus methanolicus | 36% id,
82% cov |
DHOM_EMENI / Q5B998: Homoserine dehydrogenase; HDH; EC 1.1.1.3 from Emericella nidulans
AN2882: homoserine dehydrogenase; EC 1.1.1.3 from Emericella nidulans | 27% id,
99% cov |
Q5AIA2: homoserine dehydrogenase (EC 1.1.1.3) from Candida albicans | 24% id,
99% cov |
O58802: homoserine dehydrogenase (EC 1.1.1.3) from Pyrococcus horikoshii | 27% id,
87% cov |
CA265_RS23475: aspartate kinase; homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Pedobacter sp. | 29% id,
30% cov |
AKH1_ARATH / Q9SA18: Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic; AK-HD 1; AK-HSDH 1; Beta-aspartyl phosphate homoserine 1; EC 2.7.2.4; EC 1.1.1.3 from Arabidopsis thaliana | 30% id,
27% cov |
More... |
PP_0664: homoserine dehydrogenase
is similar to: | PaperBLAST |
DvMF_1412: homoserine dehydrogenase (EC 1.1.1.3) from Desulfovibrio vulgaris | 36% id,
72% cov |
DHOM_LACLC / P52985: Homoserine dehydrogenase; HDH; EC 1.1.1.3 from Lactococcus lactis | 34% id,
74% cov |
A0A0H2WVX4: homoserine dehydrogenase (EC 1.1.1.3) from Staphylococcus aureus | 34% id,
74% cov |
DHOM_CORGL / P08499: Homoserine dehydrogenase; HDH; EC 1.1.1.3 from Corynebacterium glutamicum
P08499: homoserine dehydrogenase (EC 1.1.1.3) from Corynebacterium glutamicum | 35% id,
71% cov |
D8WXQ1: homoserine dehydrogenase (EC 1.1.1.3) from Bacillus methanolicus | 33% id,
73% cov |
Q56R01: homoserine dehydrogenase (EC 1.1.1.3) from Streptomyces clavuligerus | 33% id,
73% cov |
Ga0059261_2711: homoserine dehydrogenase (EC 1.1.1.3) from Sphingomonas koreensis | 40% id,
57% cov |
P46806: homoserine dehydrogenase (EC 1.1.1.3) from Mycobacterium leprae | 39% id,
58% cov |
O58802: homoserine dehydrogenase (EC 1.1.1.3) from Pyrococcus horikoshii | 32% id,
68% cov |
DHOM_BACSU / P19582: Homoserine dehydrogenase; HDH; EC 1.1.1.3 from Bacillus subtilis | 42% id,
52% cov |
D8WXQ2: homoserine dehydrogenase (EC 1.1.1.3) from Bacillus methanolicus | 35% id,
62% cov |
ThrD / b0002: fused aspartate kinase/homoserine dehydrogenase 1 (EC 2.7.2.4; EC 1.1.1.3) from Escherichia coli
thrA / P00561: fused aspartate kinase/homoserine dehydrogenase 1 (EC 2.7.2.4; EC 1.1.1.3) from Escherichia coli | 26% id,
42% cov |
CA265_RS23475: aspartate kinase; homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Pedobacter sp. | 30% id,
33% cov |
More... |
PP_4473: aspartokinase
is similar to: | PaperBLAST |
Echvi_2000: aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Echinicola vietnamensis | 28% id,
52% cov |
BT2403: aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Bacteroides thetaiotaomicron | 28% id,
48% cov |
CA265_RS23475: aspartate kinase; homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Pedobacter sp. | 30% id,
45% cov |
ThrD / b0002: fused aspartate kinase/homoserine dehydrogenase 1 (EC 2.7.2.4; EC 1.1.1.3) from Escherichia coli
thrA / P00561: fused aspartate kinase/homoserine dehydrogenase 1 (EC 2.7.2.4; EC 1.1.1.3) from Escherichia coli | 32% id,
42% cov |
AKH2_ARATH / O81852: Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic; AK-HD 2; AK-HSDH 2; Beta-aspartyl phosphate homoserine 2; EC 2.7.2.4; EC 1.1.1.3 from Arabidopsis thaliana | 28% id,
46% cov |
AKH1_ARATH / Q9SA18: Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic; AK-HD 1; AK-HSDH 1; Beta-aspartyl phosphate homoserine 1; EC 2.7.2.4; EC 1.1.1.3 from Arabidopsis thaliana | 27% id,
44% cov |
O63067: homoserine dehydrogenase (EC 1.1.1.3) from Glycine max | 28% id,
42% cov |
MetM / b3940: fused aspartate kinase/homoserine dehydrogenase 2 (EC 2.7.2.4; EC 1.1.1.3) from Escherichia coli
metL / P00562: fused aspartate kinase/homoserine dehydrogenase 2 (EC 2.7.2.4; EC 1.1.1.3) from Escherichia coli | 23% id,
44% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory