Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas putida KT2440 (Putida)

Found 30 curated entries in PaperBLAST's database that match '1.1.1.307' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Pseudomonas putida KT2440, or try another query

PP_2368: 2,5-diketo-D-gluconate reductase
is similar to:		 PaperBLAST

A0MTG4: D-xylose reductase (EC 1.1.1.307) from Scheffersomyces shehatae

 36% id,
93% cov

A0A455KZK8: D-xylose reductase (EC 1.1.1.307) from Thermomyces lanuginosus

 36% id,
93% cov

XYL1_CANTE / O74237: NAD(P)H-dependent D-xylose reductase; XR; EC 1.1.1.307 from Candida tenuis
O74237: D-xylose reductase (EC 1.1.1.307) from Yamadazyma tenuis

 35% id,
93% cov

More...

PP_3671: Oxidoreductase, aldo/keto reductase family
is similar to:		 PaperBLAST

XYL1_PICST / P31867: NAD(P)H-dependent D-xylose reductase; XR; EC 1.1.1.307 from Scheffersomyces stipitis
XYL1 / P31867: NAD(P)H-dependent D-xylose reductase (EC 1.1.1.21; EC 1.1.1.307) from Scheffersomyces stipitis
P31867: D-xylose reductase (EC 1.1.1.307) from Scheffersomyces stipitis

 32% id,
98% cov

A0MTG4: D-xylose reductase (EC 1.1.1.307) from Scheffersomyces shehatae

 32% id,
95% cov

Q7SD67: L-xylulose reductase (EC 1.1.1.10); D-xylose reductase (EC 1.1.1.307) from Neurospora crassa

 31% id,
95% cov

More...

PP_1314: putative NAD(P)-linked reductase
is similar to:		 PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

 30% id,
91% cov

PP_3174: putative Oxidoreductase
is similar to:		 PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

 31% id,
85% cov

P38715: methylglyoxal reductase (NADPH) (EC 1.1.1.283); D-xylose reductase (EC 1.1.1.307) from Saccharomyces cerevisiae

 28% id,
35% cov

PP_3370: 2-carboxybenzaldehyde reductase
is similar to:		 PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

 28% id,
91% cov

PP_3120: methylglyoxal reductase
is similar to:		 PaperBLAST

XYL1_ASPNG / Q9P8R5: NAD(P)H-dependent D-xylose reductase xyl1; XR; EC 1.1.1.307 from Aspergillus niger
Q9P8R5: D-xylose reductase (EC 1.1.1.307) from Aspergillus niger

 28% id,
83% cov

C5J3R6: D-xylose reductase (EC 1.1.1.307) from Rasamsonia emersonii

 27% id,
83% cov

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

 40% id,
54% cov

More...

PP_4932: putative D-arabinose 1-dehydrogenase
is similar to:		 PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

 35% id,
53% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2701842-2702714 (frame -3) on AE015451
is similar to:		 PaperBLAST

A0MTG4: D-xylose reductase (EC 1.1.1.307) from Scheffersomyces shehatae
Also see hits to annotated proteins above

 35% id,
96% cov

A0A455KZK8: D-xylose reductase (EC 1.1.1.307) from Thermomyces lanuginosus
Also see hits to annotated proteins above

 35% id,
97% cov

Q876L8: D-xylose reductase (EC 1.1.1.307) from Trichoderma reesei
Also see hits to annotated proteins above

 36% id,
35% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory