Searching in Pseudomonas putida KT2440 (Putida)
Found 4 curated entries in PaperBLAST's database that match '1.1.1.59' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 7 relevant proteins in Pseudomonas putida KT2440, or try another query
| PP_0056: choline dehydrogenase is similar to: | PaperBLAST |
dddA / C8YX89: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59) from Halomonas sp. | 59% id, 94% cov |
| PP_1949: Oxidoreductase, GMC family is similar to: | PaperBLAST |
dddA / C8YX89: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59) from Halomonas sp. | 42% id, 94% cov |
| PP_5064: choline dehydrogenase is similar to: | PaperBLAST |
dddA / C8YX89: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59) from Halomonas sp. | 41% id, 94% cov |
| PP_2650: putative 4-hydroxybutyrate dehydrogenase is similar to: | PaperBLAST |
pydE / A0A0A3J5T1: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59; EC 1.1.1.298) from Ureibacillus massiliensis | 28% id, 96% cov |
| PP_2682: Fe-containing alcohol dehydrogenase is similar to: | PaperBLAST |
pydE / A0A0A3J5T1: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59; EC 1.1.1.298) from Ureibacillus massiliensis | 28% id, 95% cov |
| PP_2803: 1,3-propanediol dehydrogenase is similar to: | PaperBLAST |
pydE / A0A0A3J5T1: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59; EC 1.1.1.298) from Ureibacillus massiliensis | 30% id, 77% cov |
| PP_2492: alcohol dehydrogenase, NAD(P)-dependent is similar to: | PaperBLAST |
pydE / A0A0A3J5T1: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59; EC 1.1.1.298) from Ureibacillus massiliensis | 25% id, 74% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 5775615-5777375 (frame +3) on AE015451 is similar to: | PaperBLAST |
dddA / C8YX89: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59) from Halomonas sp. | 40% id, 96% cov |
Lawrence Berkeley National Laboratory