Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas putida KT2440 (Putida)

Found 11 curated entries in PaperBLAST's database that match '1.1.1.67' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 12 relevant proteins in Pseudomonas putida KT2440, or try another query

PP_1914: 3-oxoacyl-[acyl-carrier-protein] reductase subunit
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

33% id,
93% cov

PP_3926: short-chain dehydrogenase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

30% id,
95% cov

PP_1946: Oxidoreductase, short chain dehydrogenase/reductase family
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

30% id,
93% cov

PP_1852: putative enoyl-[acyl-carrier-protein] reductase (NADPH, B-specific)
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

30% id,
94% cov

PP_0552: 2,3-butanediol dehydrogenase
is similar to:
PaperBLAST

Q83VI5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc pseudomesenteroides

28% id,
100% cov

Q8KQG6: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc mesenteroides

26% id,
100% cov

Q6ECH5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Limosilactobacillus reuteri

26% id,
99% cov

PP_1817: Oxidoreductase, short-chain dehydrogenase/reductase family
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

28% id,
94% cov

PP_3547: putative NAD(P)-binding oxidoreductase with NAD(P)-binding Rossmann-fold domain
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

28% id,
91% cov

PP_3839: short-chain alcohol dehydrogenase
is similar to:
PaperBLAST

Q6ECH5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Limosilactobacillus reuteri

27% id,
96% cov

Q8KQG6: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc mesenteroides

25% id,
99% cov

Q9WYD4: mannitol 2-dehydrogenase (EC 1.1.1.67) from Thermotoga maritima

23% id,
95% cov

PP_1953: Oxidoreductase, short chain dehydrogenase/reductase family
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

26% id,
93% cov

PP_0328: formaldehyde dehydrogenase
is similar to:
PaperBLAST

Q83VI5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc pseudomesenteroides

25% id,
73% cov

Q8KQG6: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc mesenteroides

26% id,
69% cov

Q6ECH5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Limosilactobacillus reuteri

23% id,
73% cov

PP_2988: Alcohol dehydrogenase, zinc-containing
is similar to:
PaperBLAST

Q6ECH5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Limosilactobacillus reuteri

36% id,
25% cov

PP_2827: Alcohol dehydrogenase, zinc-containing
is similar to:
PaperBLAST

Q83VI5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc pseudomesenteroides

34% id,
22% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. Except for 3 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

4431296-4432096 (frame +2) on AE015451
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina
Also see hits to annotated proteins above

30% id,
99% cov

2076415-2077512 (frame -2) on AE015451
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina
Also see hits to annotated proteins above

29% id,
97% cov

2042700-2043488 (frame +3) on AE015451
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina
Also see hits to annotated proteins above

27% id,
98% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory