Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas putida KT2440 (Putida)

Found 9 curated entries in PaperBLAST's database that match '1.1.2.3' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas putida KT2440, or try another query

PP_4736: L-lactate dehydrogenase
is similar to:
PaperBLAST

lldD: L-lactate dehydrogenase [cytochrome]; EC 1.1.2.3 from Escherichia coli

85% id,
96% cov

PS417_19130: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Pseudomonas simiae

76% id,
100% cov

SM_b20850: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Sinorhizobium meliloti

47% id,
98% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory