Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas putida KT2440 (Putida)

Found 15 curated entries in PaperBLAST's database that match '1.1.2.8'.

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Pseudomonas putida KT2440, or try another query

PP_2674: quinoprotein ethanol dehydrogenase
is similar to:
PaperBLAST

Q88JH5: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Pseudomonas putida

100% id,
100% cov

B1N7J0: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Pseudomonas putida

98% id,
100% cov

QEDH_PSEPU / A8R3S4: Quinoprotein ethanol dehydrogenase; QEDH; Quinoprotein alcohol dehydrogenase (cytochrome c); Quinoprotein alcohol dehydrogenase (cytochrome c550); Quinoprotein alcohol dehydrogenase ADH I; ADH I; EC 1.1.2.8 from Pseudomonas putida

90% id,
100% cov

More...

PP_2679: quinoprotein ethanol dehydrogenase
is similar to:
PaperBLAST

B1N7J5: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Pseudomonas putida

99% id,
100% cov

QEDH_PSEAE / Q9Z4J7: Quinoprotein ethanol dehydrogenase; QEDH; Quinoprotein alcohol dehydrogenase (cytochrome c); Quinoprotein alcohol dehydrogenase (cytochrome c550); EC 1.1.2.8 from Pseudomonas aeruginosa
exaA / Q9Z4J7: alcohol dehydrogenase (cytochrome c550) monomer (EC 1.1.2.8) from Pseudomonas aeruginosa
Q9Z4J7: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Pseudomonas aeruginosa

53% id,
100% cov

QEDH_PSEPU / A8R3S4: Quinoprotein ethanol dehydrogenase; QEDH; Quinoprotein alcohol dehydrogenase (cytochrome c); Quinoprotein alcohol dehydrogenase (cytochrome c550); Quinoprotein alcohol dehydrogenase ADH I; ADH I; EC 1.1.2.8 from Pseudomonas putida

53% id,
98% cov

More...

PP_3382: gluconate 2-dehydrogenase cytochrome c subunit
is similar to:
PaperBLAST

C7G3B8: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus

54% id,
88% cov

D2SZY5: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus

54% id,
88% cov

C9K502: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus

53% id,
88% cov

PP_3623: Alcohol dehydrogenase cytochrome c subunit
is similar to:
PaperBLAST

D2SZY5: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus

49% id,
88% cov

C9K502: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus

49% id,
88% cov

C7G3B8: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus

49% id,
88% cov

PP_4232: Cytochrome c family protein
is similar to:
PaperBLAST

C7G3B8: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus

38% id,
89% cov

D2SZY5: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus

38% id,
89% cov

C9K502: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus

38% id,
89% cov

PP_3948: nicotinate dehydrogenase subunit B
is similar to:
PaperBLAST

C9K502: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus

36% id,
86% cov

C7G3B8: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus

36% id,
86% cov

D2SZY5: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus

36% id,
86% cov

PP_2479: Cytochrome c family protein
is similar to:
PaperBLAST

C9K502: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus

35% id,
87% cov

D2SZY5: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus

35% id,
87% cov

C7G3B8: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus

35% id,
87% cov

PP_1444: quinoprotein glucose dehydrogenase
is similar to:
PaperBLAST

QEDH_PSEAE / Q9Z4J7: Quinoprotein ethanol dehydrogenase; QEDH; Quinoprotein alcohol dehydrogenase (cytochrome c); Quinoprotein alcohol dehydrogenase (cytochrome c550); EC 1.1.2.8 from Pseudomonas aeruginosa
exaA / Q9Z4J7: alcohol dehydrogenase (cytochrome c550) monomer (EC 1.1.2.8) from Pseudomonas aeruginosa
Q9Z4J7: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Pseudomonas aeruginosa

24% id,
58% cov

B1N7J5: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Pseudomonas putida

27% id,
36% cov

C7G3B7: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus

30% id,
31% cov

More...

PP_3823: Cytochrome c-type protein
is similar to:
PaperBLAST

C7G3B8: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus

35% id,
16% cov

C9K502: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus

35% id,
16% cov

D2SZY5: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus

35% id,
16% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory