Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas putida KT2440 (Putida)

Found 6 curated entries in PaperBLAST's database that match '1.1.3.21' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 11 relevant proteins in Pseudomonas putida KT2440, or try another query

PP_2910: L-2-hydroxyglutarate oxidase
is similar to:
PaperBLAST

glpO: glycerol-3-phosphate oxidase; EC 1.1.3.21 from Mycoplasma mycoides
Q70GP9: glycerol-3-phosphate oxidase (EC 1.1.3.21) from Mycoplasma mycoides

31% id,
71% cov

PP_5257: L-pipecolate oxidase
is similar to:
PaperBLAST

glpO: glycerol-3-phosphate oxidase; EC 1.1.3.21 from Mycoplasma mycoides
Q70GP9: glycerol-3-phosphate oxidase (EC 1.1.3.21) from Mycoplasma mycoides

26% id,
76% cov

GLPO_ENTCA / O86963: Alpha-glycerophosphate oxidase; Glycerol-3-phosphate oxidase; EC 1.1.3.21 from Enterococcus casseliflavus
glpO / O86963: glycerol-3-phosphate oxidase (EC 1.1.3.21) from Enterococcus casseliflavus

37% id,
10% cov

PP_1073: glycerol-3-phosphate dehydrogenase (aerobic)
is similar to:
PaperBLAST

GLPO_ENTCA / O86963: Alpha-glycerophosphate oxidase; Glycerol-3-phosphate oxidase; EC 1.1.3.21 from Enterococcus casseliflavus
glpO / O86963: glycerol-3-phosphate oxidase (EC 1.1.3.21) from Enterococcus casseliflavus

33% id,
57% cov

Q833L7: glycerol-3-phosphate oxidase (EC 1.1.3.21) from Enterococcus faecalis

31% id,
55% cov

PP_2246: catabolic D-arginine dehydrogenase, FAD-dependent
is similar to:
PaperBLAST

glpO: glycerol-3-phosphate oxidase; EC 1.1.3.21 from Mycoplasma mycoides
Q70GP9: glycerol-3-phosphate oxidase (EC 1.1.3.21) from Mycoplasma mycoides

19% id,
92% cov

PP_4548: putative Oxidoreductase
is similar to:
PaperBLAST

GLPO_MYCPN / P75063: Glycerol 3-phosphate oxidase; GlpO; L-alpha-glycerophosphate oxidase; EC 1.1.3.21 from Mycoplasma pneumoniae

26% id,
46% cov

GLPO_ENTCA / O86963: Alpha-glycerophosphate oxidase; Glycerol-3-phosphate oxidase; EC 1.1.3.21 from Enterococcus casseliflavus
glpO / O86963: glycerol-3-phosphate oxidase (EC 1.1.3.21) from Enterococcus casseliflavus

38% id,
10% cov

Q833L7: glycerol-3-phosphate oxidase (EC 1.1.3.21) from Enterococcus faecalis

34% id,
9% cov

PP_4311: putative D-amino acid dehydrogenase 2 small subunit
is similar to:
PaperBLAST

GLPO_MYCPN / P75063: Glycerol 3-phosphate oxidase; GlpO; L-alpha-glycerophosphate oxidase; EC 1.1.3.21 from Mycoplasma pneumoniae

46% id,
13% cov

PP_3146: putative Oxidoreductase
is similar to:
PaperBLAST

glpO: glycerol-3-phosphate oxidase; EC 1.1.3.21 from Mycoplasma mycoides
Q70GP9: glycerol-3-phosphate oxidase (EC 1.1.3.21) from Mycoplasma mycoides

40% id,
14% cov

GLPO_ENTCA / O86963: Alpha-glycerophosphate oxidase; Glycerol-3-phosphate oxidase; EC 1.1.3.21 from Enterococcus casseliflavus
glpO / O86963: glycerol-3-phosphate oxidase (EC 1.1.3.21) from Enterococcus casseliflavus

33% id,
12% cov

PP_2440: Alkyl hydroperoxide reductase subunit F
is similar to:
PaperBLAST

GLPO_ENTCA / O86963: Alpha-glycerophosphate oxidase; Glycerol-3-phosphate oxidase; EC 1.1.3.21 from Enterococcus casseliflavus
glpO / O86963: glycerol-3-phosphate oxidase (EC 1.1.3.21) from Enterococcus casseliflavus

27% id,
20% cov

PP_5273: putative Oxidoreductase
is similar to:
PaperBLAST

glpO: glycerol-3-phosphate oxidase; EC 1.1.3.21 from Mycoplasma mycoides
Q70GP9: glycerol-3-phosphate oxidase (EC 1.1.3.21) from Mycoplasma mycoides

40% id,
13% cov

GLPO_ENTCA / O86963: Alpha-glycerophosphate oxidase; Glycerol-3-phosphate oxidase; EC 1.1.3.21 from Enterococcus casseliflavus
glpO / O86963: glycerol-3-phosphate oxidase (EC 1.1.3.21) from Enterococcus casseliflavus

33% id,
12% cov

PP_5270: D-amino-acid:quinone oxidoreductase (deaminating)
is similar to:
PaperBLAST

glpO: glycerol-3-phosphate oxidase; EC 1.1.3.21 from Mycoplasma mycoides
Q70GP9: glycerol-3-phosphate oxidase (EC 1.1.3.21) from Mycoplasma mycoides

33% id,
13% cov

PP_4931: conserved protein of unknown function
is similar to:
PaperBLAST

GLPO_ENTCA / O86963: Alpha-glycerophosphate oxidase; Glycerol-3-phosphate oxidase; EC 1.1.3.21 from Enterococcus casseliflavus
glpO / O86963: glycerol-3-phosphate oxidase (EC 1.1.3.21) from Enterococcus casseliflavus

31% id,
11% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory