Searching in Pseudomonas putida KT2440 (Putida)
Found 22 curated entries in PaperBLAST's database that match '1.13.11.1' as complete word(s).
These curated entries have 18 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Pseudomonas putida KT2440, or try another query
| PP_3713: catechol 1,2-dioxygenase is similar to: | PaperBLAST |
catA / Q9AEQ0: subunit of catechol 1,2-dioxygenase (EC 1.13.11.1) from Pseudomonas putida | 84% id, 100% cov |
AO353_23525: Catechol 1,2-dioxygenase (EC 1.13.11.1) from Pseudomonas fluorescens | 69% id, 100% cov |
PfGW456L13_3822: Catechol 1,2-dioxygenase (EC 1.13.11.1) from Pseudomonas fluorescens | 67% id, 100% cov |
| PP_3166: catechol 1,2-dioxygenase is similar to: | PaperBLAST |
catA / Q9AEQ0: subunit of catechol 1,2-dioxygenase (EC 1.13.11.1) from Pseudomonas putida | 72% id, 100% cov |
salD / Q0VH42: 4-methylcatechol 1,2-dioxygenase (EC 1.13.11.1) from Pseudomonas reinekei | 65% id, 100% cov |
PfGW456L13_3822: Catechol 1,2-dioxygenase (EC 1.13.11.1) from Pseudomonas fluorescens | 64% id, 100% cov |
| PP_4656: protocatechuate 3,4-dioxygenase beta chain is similar to: | PaperBLAST |
Q8GAZ6: catechol 1,2-dioxygenase (EC 1.13.11.1) from Burkholderia sp. | 37% id, 45% cov |
| PP_4655: protocatechuate 3,4-dioxygenase alpha chain is similar to: | PaperBLAST |
Q8GAZ6: catechol 1,2-dioxygenase (EC 1.13.11.1) from Burkholderia sp. | 25% id, 62% cov |
Q8G9L3: catechol 1,2-dioxygenase (EC 1.13.11.1) from Rhodococcus opacus | 29% id, 54% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 5281011-5281709 (frame -3) on AE015451 is similar to: | PaperBLAST |
Q8G9L3: catechol 1,2-dioxygenase (EC 1.13.11.1) from Rhodococcus opacus | 26% id, 72% cov |
Lawrence Berkeley National Laboratory