Searching in Pseudomonas putida KT2440 (Putida)
Found 163 curated entries in PaperBLAST's database that match '1.13.11.5'.
These curated entries have 126 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Pseudomonas putida KT2440, or try another query
PP_4621: Homogentisate 1,2-dioxygenase is similar to: | PaperBLAST |
HGD_PSEPK / Q88E47: Homogentisate 1,2-dioxygenase; HGDO; Homogentisate oxygenase; Homogentisic acid oxidase; Homogentisicase; EC 1.13.11.5 from Pseudomonas putida | 100% id, 100% cov |
HGD_PSEPU / Q6EMI9: Homogentisate 1,2-dioxygenase; HGDO; Homogentisate oxygenase; Homogentisic acid oxidase; Homogentisicase; EC 1.13.11.5 from Pseudomonas putida | 97% id, 100% cov |
AO353_15550: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) from Pseudomonas fluorescens | 83% id, 100% cov |
PP_2518: gallate dioxygenase is similar to: | PaperBLAST |
GALA_PSEPK / Q88JX5: Gallate dioxygenase; Gallate degradation protein A; EC 1.13.11.57 from Pseudomonas putida | 100% id, 100% cov |
desB / Q5NTE5: gallate dioxygenase monomer (EC 1.13.11.57) from Sphingomonas paucimobilis | 59% id, 100% cov |
PmdB / Q8RNX9: protocatechuate 4,5-dioxygenase β subunit (EC 1.13.11.8; EC 1.13.11.57) from Comamonas testosteroni | 43% id, 100% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory