Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas putida KT2440 (Putida)

Found 22 curated entries in PaperBLAST's database that match '1.14.16.1' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pseudomonas putida KT2440, or try another query

PP_4490: phenylalanine-4-hydroxylase
is similar to:
PaperBLAST

PfGW456L13_4394: Phenylalanine 4-monooxygenase (EC 1.14.16.1) from Pseudomonas fluorescens

89% id,
100% cov

Pf6N2E2_2630: Phenylalanine 4-monooxygenase (EC 1.14.16.1) from Pseudomonas fluorescens

89% id,
100% cov

AO356_03975: Phenylalanine 4-monooxygenase (EC 1.14.16.1) from Pseudomonas fluorescens

89% id,
100% cov

More...

PP_1769: chorismate mutase/Prephenate dehydratase
is similar to:
PaperBLAST

PH4H_DICDI / Q54XS1: Phenylalanine-4-hydroxylase; PAH; Phe-4-monooxygenase; Tryptophan 5-hydroxylase; TRH; Tryptophan 5-monooxygenase; EC 1.14.16.1; EC 1.14.16.4 from Dictyostelium discoideum

32% id,
18% cov

PH4H_CAEEL / P90925: Phenylalanine-4-hydroxylase; PAH; Biogenic amine synthesis protein 2; Phe-4-monooxygenase; Tryptophan 5-monooxygenase; EC 1.14.16.1; EC 1.14.16.4 from Caenorhabditis elegans

34% id,
16% cov

PH4H_RAT / P04176: Phenylalanine-4-hydroxylase; PAH; Phe-4-monooxygenase; EC 1.14.16.1 from Rattus norvegicus
P04176: phenylalanine 4-monooxygenase (EC 1.14.16.1) from Rattus norvegicus

34% id,
15% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory