Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas putida KT2440 (Putida)

Found 15 curated entries in PaperBLAST's database that match '1.2.1.16'.

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 29 relevant proteins in Pseudomonas putida KT2440, or try another query

PP_0213: succinate-semialdehyde dehydrogenase (NADP+)
is similar to:
PaperBLAST

gabD / Q4KKA2: NAD(P)-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens

91% id,
100% cov

AO353_11505: succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens

90% id,
100% cov

GB|AAC75708.1: succinate-semialdehyde dehydrogenase [NAD(P)+]; EC 1.2.1.16 from Escherichia coli

82% id,
100% cov

More...

PP_3151: NAD+-dependent succinate semialdehyde dehydrogenase
is similar to:
PaperBLAST

SAD_ECOLI / P76149: Succinate semialdehyde dehydrogenase [NAD(P)+] Sad; SSADH; SSDH; EC 1.2.1.16 from Escherichia coli

66% id,
100% cov

Q8ZPI3: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Salmonella enterica

64% id,
100% cov

SSDH_PAENI / Q8GAI8: Succinate-semialdehyde dehydrogenase; SsaDH; EC 1.2.1.16 from Paenarthrobacter nicotinovorans

35% id,
99% cov

More...

PP_4422: succinate-semialdehyde dehydrogenase (NADP+)
is similar to:
PaperBLAST

GB|AAC75708.1: succinate-semialdehyde dehydrogenase [NAD(P)+]; EC 1.2.1.16 from Escherichia coli

51% id,
100% cov

gabD1 / Q0K2K1: NAD(P)+-dependent succinate semialdehyde dehydrogenase monomer (EC 1.2.1.16) from Cupriavidus necator
Q0K2K1: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Cupriavidus necator

51% id,
99% cov

SO1275: succinate-semialdehyde dehydrogenase (NADP+) [EC: 1.2.1.16] from Shewanella oneidensis

50% id,
99% cov

More...

PP_2488: NAD+-dependent succinate semialdehyde dehydrogenase
is similar to:
PaperBLAST

Q8ZPI3: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Salmonella enterica

43% id,
97% cov

SAD_ECOLI / P76149: Succinate semialdehyde dehydrogenase [NAD(P)+] Sad; SSADH; SSDH; EC 1.2.1.16 from Escherichia coli

41% id,
97% cov

SSDH_PAENI / Q8GAI8: Succinate-semialdehyde dehydrogenase; SsaDH; EC 1.2.1.16 from Paenarthrobacter nicotinovorans

35% id,
99% cov

More...

PP_3646: Aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

GB|AAC75708.1: succinate-semialdehyde dehydrogenase [NAD(P)+]; EC 1.2.1.16 from Escherichia coli

40% id,
99% cov

AO353_11505: succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens

40% id,
99% cov

gabD1 / Q0K2K1: NAD(P)+-dependent succinate semialdehyde dehydrogenase monomer (EC 1.2.1.16) from Cupriavidus necator
Q0K2K1: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Cupriavidus necator

40% id,
97% cov

More...

PP_2589: Aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

gabD1 / Q0K2K1: NAD(P)+-dependent succinate semialdehyde dehydrogenase monomer (EC 1.2.1.16) from Cupriavidus necator
Q0K2K1: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Cupriavidus necator

40% id,
97% cov

AO353_11505: succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens

38% id,
99% cov

GB|AAC75708.1: succinate-semialdehyde dehydrogenase [NAD(P)+]; EC 1.2.1.16 from Escherichia coli

38% id,
96% cov

More...

PP_1481: medium chain aldehyde dehydrogenase
is similar to:
PaperBLAST

GB|AAC75708.1: succinate-semialdehyde dehydrogenase [NAD(P)+]; EC 1.2.1.16 from Escherichia coli

39% id,
98% cov

gabD / Q4KKA2: NAD(P)-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens

39% id,
98% cov

AO353_11505: succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens

39% id,
98% cov

More...

PP_2487: putative aldehyde dehydrogenase
is similar to:
PaperBLAST

gabD / Q4KKA2: NAD(P)-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens

39% id,
97% cov

GB|AAC75708.1: succinate-semialdehyde dehydrogenase [NAD(P)+]; EC 1.2.1.16 from Escherichia coli

39% id,
97% cov

AO353_11505: succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens

39% id,
97% cov

More...

PP_5278: 4-guanidinobutyraldehyde dehydrogenase
is similar to:
PaperBLAST

AO353_11505: succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens

38% id,
99% cov

gabD / Q4KKA2: NAD(P)-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens

39% id,
96% cov

gabD1 / Q0K2K1: NAD(P)+-dependent succinate semialdehyde dehydrogenase monomer (EC 1.2.1.16) from Cupriavidus necator
Q0K2K1: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Cupriavidus necator

38% id,
97% cov

More...

PP_2801: gamma-aminobutyraldehyde dehydrogenase
is similar to:
PaperBLAST

GB|AAC75708.1: succinate-semialdehyde dehydrogenase [NAD(P)+]; EC 1.2.1.16 from Escherichia coli

39% id,
98% cov

AO353_11505: succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens

37% id,
98% cov

gabD1 / Q0K2K1: NAD(P)+-dependent succinate semialdehyde dehydrogenase monomer (EC 1.2.1.16) from Cupriavidus necator
Q0K2K1: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Cupriavidus necator

36% id,
99% cov

More...

PP_3463: phenylacetaldehyde dehydrogenase
is similar to:
PaperBLAST

GB|AAC75708.1: succinate-semialdehyde dehydrogenase [NAD(P)+]; EC 1.2.1.16 from Escherichia coli

39% id,
97% cov

P94428: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Bacillus subtilis

38% id,
99% cov

AO353_11505: succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens

38% id,
97% cov

More...

PP_1948: Benzaldehyde dehydrogenase
is similar to:
PaperBLAST

SSDH_PAENI / Q8GAI8: Succinate-semialdehyde dehydrogenase; SsaDH; EC 1.2.1.16 from Paenarthrobacter nicotinovorans

38% id,
97% cov

gabD1 / Q0K2K1: NAD(P)+-dependent succinate semialdehyde dehydrogenase monomer (EC 1.2.1.16) from Cupriavidus necator
Q0K2K1: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Cupriavidus necator

38% id,
97% cov

AO353_11505: succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens

36% id,
100% cov

More...

PP_0708: putative Betaine-aldehyde dehydrogenase
is similar to:
PaperBLAST

GB|AAC75708.1: succinate-semialdehyde dehydrogenase [NAD(P)+]; EC 1.2.1.16 from Escherichia coli

38% id,
97% cov

gabD / Q4KKA2: NAD(P)-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens

38% id,
97% cov

AO353_11505: succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens

38% id,
97% cov

More...

PP_5063: betaine aldehyde dehydrogenase, NAD-dependent
is similar to:
PaperBLAST

P94428: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Bacillus subtilis

37% id,
98% cov

gabD1 / Q0K2K1: NAD(P)+-dependent succinate semialdehyde dehydrogenase monomer (EC 1.2.1.16) from Cupriavidus necator
Q0K2K1: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Cupriavidus necator

37% id,
97% cov

AO353_11505: succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens

37% id,
97% cov

More...

PP_2680: aldehyde dehydrogenase
is similar to:
PaperBLAST

SSDH_PAENI / Q8GAI8: Succinate-semialdehyde dehydrogenase; SsaDH; EC 1.2.1.16 from Paenarthrobacter nicotinovorans

36% id,
99% cov

P94428: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Bacillus subtilis

35% id,
98% cov

GB|AAC75708.1: succinate-semialdehyde dehydrogenase [NAD(P)+]; EC 1.2.1.16 from Escherichia coli

34% id,
98% cov

More...

PP_3357: vanillin dehydrogenase
is similar to:
PaperBLAST

gabD1 / Q0K2K1: NAD(P)+-dependent succinate semialdehyde dehydrogenase monomer (EC 1.2.1.16) from Cupriavidus necator
Q0K2K1: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Cupriavidus necator

36% id,
98% cov

SO1275: succinate-semialdehyde dehydrogenase (NADP+) [EC: 1.2.1.16] from Shewanella oneidensis

36% id,
98% cov

SSDH_PAENI / Q8GAI8: Succinate-semialdehyde dehydrogenase; SsaDH; EC 1.2.1.16 from Paenarthrobacter nicotinovorans

35% id,
99% cov

More...

PP_2694: Aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

gabD1 / Q0K2K1: NAD(P)+-dependent succinate semialdehyde dehydrogenase monomer (EC 1.2.1.16) from Cupriavidus necator
Q0K2K1: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Cupriavidus necator

37% id,
96% cov

gabD / Q4KKA2: NAD(P)-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens

35% id,
96% cov

P94428: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Bacillus subtilis

35% id,
98% cov

More...

PP_0545: aldehyde dehydrogenase
is similar to:
PaperBLAST

SSDH_PAENI / Q8GAI8: Succinate-semialdehyde dehydrogenase; SsaDH; EC 1.2.1.16 from Paenarthrobacter nicotinovorans

35% id,
99% cov

AO353_11505: succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens

34% id,
98% cov

GB|AAC75708.1: succinate-semialdehyde dehydrogenase [NAD(P)+]; EC 1.2.1.16 from Escherichia coli

34% id,
97% cov

More...

PP_0665: putative glyceraldehyde-3-phosphate dehydrogenase
is similar to:
PaperBLAST

gabD1 / Q0K2K1: NAD(P)+-dependent succinate semialdehyde dehydrogenase monomer (EC 1.2.1.16) from Cupriavidus necator
Q0K2K1: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Cupriavidus necator

36% id,
95% cov

Q976X5: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); aldehyde dehydrogenase [NAD(P)+] (EC 1.2.1.5) from Sulfurisphaera tokodaii

34% id,
99% cov

GB|AAC75708.1: succinate-semialdehyde dehydrogenase [NAD(P)+]; EC 1.2.1.16 from Escherichia coli

34% id,
94% cov

More...

PP_0597: methylmalonate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

P94428: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Bacillus subtilis

34% id,
98% cov

SSDH_PAENI / Q8GAI8: Succinate-semialdehyde dehydrogenase; SsaDH; EC 1.2.1.16 from Paenarthrobacter nicotinovorans

33% id,
97% cov

gabD / Q4KKA2: NAD(P)-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens

33% id,
93% cov

More...

PP_5372: Aldehyde dehydrogenase
is similar to:
PaperBLAST

gabD1 / Q0K2K1: NAD(P)+-dependent succinate semialdehyde dehydrogenase monomer (EC 1.2.1.16) from Cupriavidus necator
Q0K2K1: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Cupriavidus necator

33% id,
97% cov

SSDH_PAENI / Q8GAI8: Succinate-semialdehyde dehydrogenase; SsaDH; EC 1.2.1.16 from Paenarthrobacter nicotinovorans

33% id,
99% cov

Q8ZPI3: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Salmonella enterica

33% id,
98% cov

More...

PP_4478: N-succinylglutamate 5-semialdehyde dehydrogenase
is similar to:
PaperBLAST

GB|AAC75708.1: succinate-semialdehyde dehydrogenase [NAD(P)+]; EC 1.2.1.16 from Escherichia coli

33% id,
95% cov

gabD1 / Q0K2K1: NAD(P)+-dependent succinate semialdehyde dehydrogenase monomer (EC 1.2.1.16) from Cupriavidus necator
Q0K2K1: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Cupriavidus necator

33% id,
94% cov

SO1275: succinate-semialdehyde dehydrogenase (NADP+) [EC: 1.2.1.16] from Shewanella oneidensis

31% id,
95% cov

More...

PP_5258: L-piperidine-6-carboxylate dehydrogenase
is similar to:
PaperBLAST

P94428: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Bacillus subtilis

31% id,
97% cov

gabD1 / Q0K2K1: NAD(P)+-dependent succinate semialdehyde dehydrogenase monomer (EC 1.2.1.16) from Cupriavidus necator
Q0K2K1: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Cupriavidus necator

31% id,
94% cov

GB|AAC75708.1: succinate-semialdehyde dehydrogenase [NAD(P)+]; EC 1.2.1.16 from Escherichia coli

31% id,
92% cov

More...

PP_4667: methylmalonate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

GB|AAC75708.1: succinate-semialdehyde dehydrogenase [NAD(P)+]; EC 1.2.1.16 from Escherichia coli

31% id,
98% cov

SO1275: succinate-semialdehyde dehydrogenase (NADP+) [EC: 1.2.1.16] from Shewanella oneidensis

30% id,
99% cov

P94428: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Bacillus subtilis

30% id,
98% cov

More...

PP_4947: proline dehydrogenase/1-pyrroline-5-carboxylate dehydrogenase
is similar to:
PaperBLAST

GB|AAC75708.1: succinate-semialdehyde dehydrogenase [NAD(P)+]; EC 1.2.1.16 from Escherichia coli

32% id,
94% cov

gabD1 / Q0K2K1: NAD(P)+-dependent succinate semialdehyde dehydrogenase monomer (EC 1.2.1.16) from Cupriavidus necator
Q0K2K1: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Cupriavidus necator

32% id,
94% cov

SO1275: succinate-semialdehyde dehydrogenase (NADP+) [EC: 1.2.1.16] from Shewanella oneidensis

31% id,
94% cov

More...

PP_3443: putative glyceraldehyde-3-phosphate dehydrogenase
is similar to:
PaperBLAST

GB|AAC75708.1: succinate-semialdehyde dehydrogenase [NAD(P)+]; EC 1.2.1.16 from Escherichia coli

29% id,
97% cov

SSDH_PAENI / Q8GAI8: Succinate-semialdehyde dehydrogenase; SsaDH; EC 1.2.1.16 from Paenarthrobacter nicotinovorans

28% id,
94% cov

Q976X5: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); aldehyde dehydrogenase [NAD(P)+] (EC 1.2.1.5) from Sulfurisphaera tokodaii

26% id,
98% cov

More...

PP_5120: coniferyl aldehyde dehydrogenase
is similar to:
PaperBLAST

SSDH_PAENI / Q8GAI8: Succinate-semialdehyde dehydrogenase; SsaDH; EC 1.2.1.16 from Paenarthrobacter nicotinovorans

27% id,
94% cov

Q8ZPI3: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Salmonella enterica

27% id,
93% cov

Q976X5: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); aldehyde dehydrogenase [NAD(P)+] (EC 1.2.1.5) from Sulfurisphaera tokodaii

27% id,
90% cov

More...

PP_1256: putative alpha-ketoglutarate semialdehyde dehydrogenase
is similar to:
PaperBLAST

SO1275: succinate-semialdehyde dehydrogenase (NADP+) [EC: 1.2.1.16] from Shewanella oneidensis

25% id,
91% cov

gabD1 / Q0K2K1: NAD(P)+-dependent succinate semialdehyde dehydrogenase monomer (EC 1.2.1.16) from Cupriavidus necator
Q0K2K1: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Cupriavidus necator

26% id,
82% cov

GB|AAC75708.1: succinate-semialdehyde dehydrogenase [NAD(P)+]; EC 1.2.1.16 from Escherichia coli

26% id,
84% cov

More...

PP_3270: oxepin-CoA hydrolase/3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase
is similar to:
PaperBLAST

Q8ZPI3: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Salmonella enterica

25% id,
90% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 29 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory