Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas putida KT2440 (Putida)

Found 37 curated entries in PaperBLAST's database that match '1.5.1.1'.

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 36 relevant proteins in Pseudomonas putida KT2440, or try another query

PP_3591: Delta 1-piperideine-2-carboxylate reductase
is similar to:
PaperBLAST

dpkA / Q88GX6: Δ1-piperideine-2-carboxylate reductase (EC 1.5.1.1) from Pseudomonas putida

100% id,
100% cov

Q4U331: 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] (EC 1.5.1.1); 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase (NADPH) (EC 1.5.1.21) from Pseudomonas syringae

72% id,
96% cov

PP_4947: proline dehydrogenase/1-pyrroline-5-carboxylate dehydrogenase
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

73% id,
100% cov

prnC: delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; EC 1.5.1.12 from Emericella nidulans

32% id,
90% cov

PP_1945: methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase
is similar to:
PaperBLAST

MTDC_DROME / Q04448: Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial; DNMDMC; EC 1.5.1.15; EC 3.5.4.9 from Drosophila melanogaster

49% id,
95% cov

Q46A53: methylenetetrahydrofolate dehydrogenase (NAD+) (EC 1.5.1.15); methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) from Methanosarcina barkeri

46% id,
97% cov

MTDC_HUMAN / P13995: Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial; EC 1.5.1.15; EC 3.5.4.9 from Homo sapiens
MTHFD2 / P13995: methenyltetrahydrofolate cyclohydrolase (EC 1.5.1.15; EC 3.5.4.9) from Homo sapiens

45% id,
85% cov

More...

PP_2265: methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase
is similar to:
PaperBLAST

MTDC_DROME / Q04448: Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial; DNMDMC; EC 1.5.1.15; EC 3.5.4.9 from Drosophila melanogaster

49% id,
95% cov

Q46A53: methylenetetrahydrofolate dehydrogenase (NAD+) (EC 1.5.1.15); methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) from Methanosarcina barkeri

48% id,
97% cov

MTD2L_MOUSE / D3YZG8: Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase 2, mitochondrial; NADP-dependent methylenetetrahydrofolate dehydrogenase 2-like protein; MTHFD2-like; EC 1.5.1.15; EC 1.5.1.5; EC 3.5.4.9 from Mus musculus

44% id,
87% cov

More...

PP_4431: Ornithine cyclodeaminase 1
is similar to:
PaperBLAST

CRYM / Q14894: ketimine reductase monomer (EC 1.5.1.1; EC 1.5.1.25) from Homo sapiens

30% id,
100% cov

PP_0708: putative Betaine-aldehyde dehydrogenase
is similar to:
PaperBLAST

prnC: delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; EC 1.5.1.12 from Emericella nidulans

31% id,
85% cov

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

32% id,
32% cov

PP_3357: vanillin dehydrogenase
is similar to:
PaperBLAST

prnC: delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; EC 1.5.1.12 from Emericella nidulans

29% id,
88% cov

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

27% id,
34% cov

PP_3190: Ornithine cyclodeaminase/mu-crystallin family protein
is similar to:
PaperBLAST

Q485R8: 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] (EC 1.5.1.1) from Colwellia psychrerythraea

26% id,
98% cov

PP_2589: Aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

prnC: delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; EC 1.5.1.12 from Emericella nidulans

30% id,
83% cov

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

30% id,
34% cov

PP_4452: NAD/NADP octopine/nopaline dehydrogenase family protein
is similar to:
PaperBLAST

ocs / P0A395: protein ocs (EC 1.5.1.16; EC 1.5.1.11) from Agrobacterium tumefaciens

25% id,
98% cov

PP_5063: betaine aldehyde dehydrogenase, NAD-dependent
is similar to:
PaperBLAST

prnC: delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; EC 1.5.1.12 from Emericella nidulans

28% id,
86% cov

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

30% id,
33% cov

PP_5372: Aldehyde dehydrogenase
is similar to:
PaperBLAST

prnC: delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; EC 1.5.1.12 from Emericella nidulans

29% id,
85% cov

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

32% id,
34% cov

PP_1948: Benzaldehyde dehydrogenase
is similar to:
PaperBLAST

prnC: delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; EC 1.5.1.12 from Emericella nidulans

29% id,
82% cov

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

28% id,
32% cov

PP_5278: 4-guanidinobutyraldehyde dehydrogenase
is similar to:
PaperBLAST

prnC: delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; EC 1.5.1.12 from Emericella nidulans

29% id,
82% cov

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

30% id,
34% cov

PP_2487: putative aldehyde dehydrogenase
is similar to:
PaperBLAST

prnC: delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; EC 1.5.1.12 from Emericella nidulans

30% id,
78% cov

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

29% id,
33% cov

PP_2694: Aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

prnC: delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; EC 1.5.1.12 from Emericella nidulans

29% id,
81% cov

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

30% id,
33% cov

PP_3463: phenylacetaldehyde dehydrogenase
is similar to:
PaperBLAST

prnC: delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; EC 1.5.1.12 from Emericella nidulans

27% id,
84% cov

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

28% id,
34% cov

PP_0597: methylmalonate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

prnC: delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; EC 1.5.1.12 from Emericella nidulans

27% id,
85% cov

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

28% id,
33% cov

PP_2801: gamma-aminobutyraldehyde dehydrogenase
is similar to:
PaperBLAST

prnC: delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; EC 1.5.1.12 from Emericella nidulans

29% id,
79% cov

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

29% id,
33% cov

PP_0213: succinate-semialdehyde dehydrogenase (NADP+)
is similar to:
PaperBLAST

prnC: delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; EC 1.5.1.12 from Emericella nidulans

26% id,
84% cov

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

30% id,
34% cov

PP_2488: NAD+-dependent succinate semialdehyde dehydrogenase
is similar to:
PaperBLAST

prnC: delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; EC 1.5.1.12 from Emericella nidulans

25% id,
82% cov

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

29% id,
33% cov

PP_3443: putative glyceraldehyde-3-phosphate dehydrogenase
is similar to:
PaperBLAST

prnC: delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; EC 1.5.1.12 from Emericella nidulans

25% id,
76% cov

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

25% id,
35% cov

PP_3533: putative ornithine cyclodeaminase
is similar to:
PaperBLAST

CRYM / Q14894: ketimine reductase monomer (EC 1.5.1.1; EC 1.5.1.25) from Homo sapiens

27% id,
68% cov

PP_4977: 5,10-methylenetetrahydrofolate reductase
is similar to:
PaperBLAST

Q9WU20: methylenetetrahydrofolate dehydrogenase (NAD+) (EC 1.5.1.15); methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Mus musculus

36% id,
44% cov

PP_1481: medium chain aldehyde dehydrogenase
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

30% id,
34% cov

PP_4422: succinate-semialdehyde dehydrogenase (NADP+)
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

29% id,
36% cov

PP_5258: L-piperidine-6-carboxylate dehydrogenase
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

30% id,
34% cov

PP_2680: aldehyde dehydrogenase
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

29% id,
34% cov

PP_3646: Aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

29% id,
34% cov

PP_4667: methylmalonate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

28% id,
34% cov

PP_0665: putative glyceraldehyde-3-phosphate dehydrogenase
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

28% id,
34% cov

PP_4478: N-succinylglutamate 5-semialdehyde dehydrogenase
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

28% id,
34% cov

PP_0545: aldehyde dehydrogenase
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

27% id,
34% cov

PP_5120: coniferyl aldehyde dehydrogenase
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

27% id,
30% cov

PP_1256: putative alpha-ketoglutarate semialdehyde dehydrogenase
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

28% id,
28% cov

PP_3151: NAD+-dependent succinate semialdehyde dehydrogenase
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

25% id,
32% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 36 reading frames. Except for 3 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2200319-2201296 (frame +2) on AE015451
is similar to:
PaperBLAST

MTDC_DROME / Q04448: Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial; DNMDMC; EC 1.5.1.15; EC 3.5.4.9 from Drosophila melanogaster
Also see hits to annotated proteins above

49% id,
97% cov

MTD2L_HUMAN / Q9H903: Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase 2, mitochondrial; NADP-dependent methylenetetrahydrofolate dehydrogenase 2-like protein; MTHFD2-like; EC 1.5.1.15; EC 1.5.1.5; EC 3.5.4.9 from Homo sapiens
Q9H903: methylenetetrahydrofolate dehydrogenase (NAD+) (EC 1.5.1.15); methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5); methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) from Homo sapiens
Also see hits to annotated proteins above

43% id,
95% cov

MTD2L_RAT / D3ZUA0: Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase 2, mitochondrial; NADP-dependent methylenetetrahydrofolate dehydrogenase 2-like protein; MTHFD2-like; EC 1.5.1.15; EC 1.5.1.5; EC 3.5.4.9 from Rattus norvegicus
Also see hits to annotated proteins above

42% id,
94% cov

More...

2584646-2585599 (frame -1) on AE015451
is similar to:
PaperBLAST

MTDC_DROME / Q04448: Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial; DNMDMC; EC 1.5.1.15; EC 3.5.4.9 from Drosophila melanogaster
Also see hits to annotated proteins above

48% id,
97% cov

MTD2L_HUMAN / Q9H903: Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase 2, mitochondrial; NADP-dependent methylenetetrahydrofolate dehydrogenase 2-like protein; MTHFD2-like; EC 1.5.1.15; EC 1.5.1.5; EC 3.5.4.9 from Homo sapiens
Q9H903: methylenetetrahydrofolate dehydrogenase (NAD+) (EC 1.5.1.15); methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5); methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) from Homo sapiens
Also see hits to annotated proteins above

44% id,
87% cov

5669410-5670405 (frame +1) on AE015451
is similar to:
PaperBLAST

Q9WU20: methylenetetrahydrofolate dehydrogenase (NAD+) (EC 1.5.1.15); methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Mus musculus
Also see hits to annotated proteins above

34% id,
51% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory