Curated BLAST for Genomes


Curated BLAST

Searching in Pseudomonas putida KT2440 (Putida)

Found 5 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas putida KT2440, or try another query

PP_0303: dehydrocarnitine cleavage enzyme
is similar to:

KCE_FUSNN / Q8RHX2: 3-keto-5-aminohexanoate cleavage enzyme; EC from Fusobacterium nucleatum
kce / Q8RHX2: 3-keto,5-aminohexanoate cleavage enzyme subunit (EC from Fusobacterium nucleatum
Q8RHX2: 3-keto-5-aminohexanoate cleavage enzyme (EC from Fusobacterium nucleatum

39% id,
100% cov

KCE_CLOAI / B0VHH0: 3-keto-5-aminohexanoate cleavage enzyme; EC from Cloacimonas acidaminovorans
B0VHH0: 3-keto-5-aminohexanoate cleavage enzyme (EC from Candidatus Cloacimonas

34% id,
99% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory