Searching in Pseudomonas putida KT2440 (Putida)
Found 22 curated entries in PaperBLAST's database that match '2.3.3.14' as complete word(s).
These curated entries have 14 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Pseudomonas putida KT2440, or try another query
| PP_1025: 2-isopropylmalate synthase is similar to: | PaperBLAST |
D0VY45: homocitrate synthase (EC 2.3.3.14) from Lotus japonicus | 27% id, 94% cov |
AKSA_METJA / Q57926: Homocitrate synthase AksA; (R)-homo(2)citrate synthase; (R)-homo(3)citrate synthase; EC 2.3.3.14; EC 2.3.3.- from Methanocaldococcus jannaschii | 27% id, 90% cov |
NIFV_AZOVI / P05342: Homocitrate synthase; EC 2.3.3.14 from Azotobacter vinelandii | 29% id, 52% cov |
| PP_1791: putative Aldolase/synthase is similar to: | PaperBLAST |
P58637: homocitrate synthase (EC 2.3.3.14) from Nostoc sp. | 23% id, 75% cov |
HOSA_SULTO / Q971S5: Homocitrate synthase; HCS; EC 2.3.3.14 from Sulfurisphaera tokodaii | 25% id, 69% cov |
A0A0S6UXF5: homocitrate synthase (EC 2.3.3.14) from Bradyrhizobium sp. | 28% id, 58% cov |
| PP_3394: putative 3-hydroxy-3-methylglutaryl-CoA lyase is similar to: | PaperBLAST |
M1U949: homocitrate synthase (EC 2.3.3.14) from Flammulina velutipes | 24% id, 62% cov |
HOSC_YEAST / P48570: Homocitrate synthase, cytosolic isozyme; HCS; EC 2.3.3.14 from Saccharomyces cerevisiae | 23% id, 50% cov |
HOSM_YEAST / Q12122: Homocitrate synthase, mitochondrial; HCS; EC 2.3.3.14 from Saccharomyces cerevisiae | 23% id, 49% cov |
| PP_0663: Transcriptional regulator, AsnC family is similar to: | PaperBLAST |
HOSA_SULTO / Q971S5: Homocitrate synthase; HCS; EC 2.3.3.14 from Sulfurisphaera tokodaii | 31% id, 27% cov |
HOSA_SULAC / Q4J989: Homocitrate synthase; HCS; EC 2.3.3.14 from Sulfolobus acidocaldarius | 25% id, 26% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 3844710-3845858 (frame -3) on AE015451 is similar to: | PaperBLAST |
M1U949: homocitrate synthase (EC 2.3.3.14) from Flammulina velutipes | 24% id, 67% cov |
HOSA_SULAC / Q4J989: Homocitrate synthase; HCS; EC 2.3.3.14 from Sulfolobus acidocaldarius | 25% id, 62% cov |
Lawrence Berkeley National Laboratory