Searching in Pseudomonas putida KT2440 (Putida)
Found 11 curated entries in PaperBLAST's database that match '2.3.3.21' as complete word(s).
These curated entries have 6 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Pseudomonas putida KT2440, or try another query
| PP_1025: 2-isopropylmalate synthase is similar to: | PaperBLAST |
CIMA_METJA / Q58787: (R)-citramalate synthase CimA; EC 2.3.3.21 from Methanocaldococcus jannaschii | 24% id, 99% cov |
CIMA_GEOSL / Q74C76: (R)-citramalate synthase; Citramalate synthase; EC 2.3.3.21 from Geobacter sulfurreducens | 23% id, 97% cov |
DVU1914: (R)-citramalate synthase (EC 2.3.3.21) from Desulfovibrio vulgaris | 25% id, 61% cov |
| PP_5346: pyruvate carboxylase subunit B is similar to: | PaperBLAST |
B0K6M2: (R)-citramalate synthase (EC 2.3.3.21) from Thermoanaerobacter sp. | 21% id, 45% cov |
| PP_1791: putative Aldolase/synthase is similar to: | PaperBLAST |
B0K6M2: (R)-citramalate synthase (EC 2.3.3.21) from Thermoanaerobacter sp. | 21% id, 42% cov |
CIMA_METJA / Q58787: (R)-citramalate synthase CimA; EC 2.3.3.21 from Methanocaldococcus jannaschii | 27% id, 25% cov |
CIMA_GEOSL / Q74C76: (R)-citramalate synthase; Citramalate synthase; EC 2.3.3.21 from Geobacter sulfurreducens | 36% id, 16% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 3844710-3845858 (frame -3) on AE015451 is similar to: | PaperBLAST |
CIMA_LEPIN / Q8F3Q1: (R)-citramalate synthase CimA; LiCMS; EC 2.3.3.21 from Leptospira interrogans | 23% id, 57% cov |
Lawrence Berkeley National Laboratory