Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Pseudomonas putida KT2440 (Putida)

Found 107 curated entries in PaperBLAST's database that match '2.4.1.13' as complete word(s).

These curated entries have 69 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Pseudomonas putida KT2440, or try another query

PP_4943: putative Glycosyl transferase is similar to:	PaperBLAST
BAB20799.1: sucrose synthase 1 (Sus1;PypSUS1) (EC 2.4.1.13)	23% id, 38% cov
SUS_DENA2 / D4H6M0: Sucrose synthase; SuSyDa; EC 2.4.1.13 from Denitrovibrio acetiphilus ADD69694.1: sucrose synthase (SuSyDa;Dacet_2944) (EC 2.4.1.13) D4H6M0: sucrose synthase (EC 2.4.1.13) from Denitrovibrio acetiphilus	25% id, 34% cov
SUS_ACICK / A0A059ZV61: Sucrose synthase; SuSyAc; EC 2.4.1.13 from Acidithiobacillus caldus AIA55343.1: sucrose synthase (SuSyAc;Acaty_c1477) (EC 2.4.1.13) A0A059ZV61: sucrose synthase (EC 2.4.1.13) from Acidithiobacillus caldus	27% id, 29% cov
BAC91548.1: sucrose synthase (SusA;SpsA;Gv-SuS;gvip490;gll3607) (EC 2.4.1.13)	24% id, 31% cov
SUS_NITEU / Q820M5: Sucrose synthase; SuSyNe; EC 2.4.1.13 from Nitrosomonas europaea CAD85125.1: sucrose synthase (Ss2;SuSyNe;NE1214) (EC 2.4.1.13) Q820M5: sucrose synthase (EC 2.4.1.13) from Nitrosomonas europaea	26% id, 21% cov
CAA09297.1: sucrose synthase II (SS-II;SusA) (EC 2.4.1.13)	25% id, 20% cov
CAA03935.1: Sucrose synthase type 2 (EC 2.4.1.13)	24% id, 21% cov
AAR19769.1: sucrose synthase (SBSS2) (EC 2.4.1.13)	25% id, 18% cov
CAB38022.1: sucrose synthase (Ss2) (EC 2.4.1.13)	22% id, 20% cov
CAA65640.1: sucrose synthase (EC 2.4.1.13)	24% id, 19% cov
CAA57881.1: sucrose synthase (Css1) (EC 2.4.1.13)	25% id, 18% cov
Q84T18: sucrose synthase (EC 2.4.1.13) from Solanum tuberosum	24% id, 18% cov
E0Z1D1: sucrose synthase (EC 2.4.1.13) from Solanum lycopersicum	24% id, 18% cov
AAF85966.1: sucrose synthase-2 (Susy2) (EC 2.4.1.13)	24% id, 18% cov
SUS1_HORVU / P31922: Sucrose synthase 1; Sucrose-UDP glucosyltransferase 1; EC 2.4.1.13 from Hordeum vulgare CAA46701.1: sucrose synthase 1 (Ss1) (EC 2.4.1.13) P31922: sucrose synthase (EC 2.4.1.13) from Hordeum vulgare	24% id, 17% cov
SUS_THEVB / Q8DK23: Sucrose synthase; SuSyTe; EC 2.4.1.13 from Thermosynechococcus vestitus BAC08600.1: ADP-Glc: sucrose synthase (SusA;Te-SuS;Tlr1047) (EC 2.4.1.13)	24% id, 17% cov
SUS2_HORVU / P31923: Sucrose synthase 2; Sucrose-UDP glucosyltransferase 2; EC 2.4.1.13 from Hordeum vulgare CAA49551.1: Sucrose synthase 2 (EC 2.4.1.13)	21% id, 20% cov
AAM95943.1: sucrose synthase (Sus1) (EC 2.4.1.13)	25% id, 16% cov
BAA88981.1: sucrose synthase (CitSUSA-2) (EC 2.4.1.13)	23% id, 17% cov
BAA88904.1: sucrose synthase (CitSUSA) (EC 2.4.1.13) Q9SLY2: sucrose synthase (EC 2.4.1.13) from Citrus unshiu	23% id, 17% cov
BAB10337.1: At5g49190/K21P3.6 (sucrose synthase;Sus2) (EC 2.4.1.13)	23% id, 17% cov
SUS2_ARATH / Q00917: Sucrose synthase 2; AtSUS2; Sucrose-UDP glucosyltransferase 2; EC 2.4.1.13 from Arabidopsis thaliana Q00917: sucrose synthase (EC 2.4.1.13) from Arabidopsis thaliana	23% id, 17% cov
SUS2_ORYSJ / P30298: Sucrose synthase 2; OsSUS2; Sucrose synthase 1; RSs1; Sucrose-UDP glucosyltransferase 2; EC 2.4.1.13 from Oryza sativa AAL31375.1: sucrose synthase 1 (Os06g0194900) (EC 2.4.1.13)	22% id, 17% cov
AAM95944.1: sucrose synthase (Sus) (EC 2.4.1.13)	22% id, 17% cov
Q00P16: sucrose synthase (EC 2.4.1.13) from Eucalyptus grandis	22% id, 17% cov
SUS4_ORYSJ / Q10LP5: Sucrose synthase 4; OsSUS4; Sucrose-UDP glucosyltransferase 4; EC 2.4.1.13 from Oryza sativa	26% id, 14% cov
CAA26229.1: sucrose synthase 1 (SH-1) (EC 2.4.1.13)	21% id, 17% cov
SUS_SOYBN / P13708: Sucrose synthase; Nodulin-100; N-100; Sucrose-UDP glucosyltransferase; EC 2.4.1.13 from Glycine max AAC39323.1: sucrose synthase (SS;GmSS;SUSY;GmSuSy;GmSUS;Nodulin-100) (EC 2.4.1.13) SS / P13708: sucrose synthase (EC 2.4.1.13) from Glycine max P13708: sucrose synthase (EC 2.4.1.13) from Glycine max	28% id, 12% cov
BAA01108.1: sucrose synthase (Ss1) (EC 2.4.1.13)	27% id, 12% cov
Q00P15: sucrose synthase (EC 2.4.1.13) from Eucalyptus grandis	26% id, 13% cov
SUS_MELRP / I7A3T6: Sucrose synthase; SuSyMr; EC 2.4.1.13 from Melioribacter roseus AFN74551.1: sucrose synthase (SuSyMr;MROS_1314) (EC 2.4.1.13) I7A3T6: sucrose synthase (EC 2.4.1.13) from Melioribacter roseus	26% id, 12% cov
AAL50571.1: sucrose synthase (Sus2;BoSuS2) (EC 2.4.1.13)	30% id, 10% cov
AAK65960.1: sucrose synthase (SS1;SBSS1) (EC 2.4.1.13)	31% id, 10% cov
SUS3_ARATH / Q9M111: Sucrose synthase 3; AtSUS3; Sucrose-UDP glucosyltransferase 3; EC 2.4.1.13 from Arabidopsis thaliana SUS3 / Q9M111: sucrose synthase (EC 2.4.1.13) from Arabidopsis thaliana Q9M111: sucrose synthase (EC 2.4.1.13) from Arabidopsis thaliana	28% id, 8% cov
More...

PP_1801: Glycosyl transferase WbpY is similar to:	PaperBLAST
SUS_ACICK / A0A059ZV61: Sucrose synthase; SuSyAc; EC 2.4.1.13 from Acidithiobacillus caldus AIA55343.1: sucrose synthase (SuSyAc;Acaty_c1477) (EC 2.4.1.13) A0A059ZV61: sucrose synthase (EC 2.4.1.13) from Acidithiobacillus caldus	28% id, 24% cov
E0Z1D0: sucrose synthase (EC 2.4.1.13) from Solanum lycopersicum	28% id, 18% cov
SUS6_ARATH / Q9FX32: Sucrose synthase 6; AtSUS6; Sucrose-UDP glucosyltransferase 6; EC 2.4.1.13 from Arabidopsis thaliana SUS6 / Q9FX32: sucrose synthase (EC 2.4.1.13) from Arabidopsis thaliana Q9FX32: sucrose synthase (EC 2.4.1.13) from Arabidopsis thaliana	23% id, 22% cov
Q0E7D4: sucrose synthase (EC 2.4.1.13) from Coffea arabica	27% id, 18% cov
SUS_MELRP / I7A3T6: Sucrose synthase; SuSyMr; EC 2.4.1.13 from Melioribacter roseus AFN74551.1: sucrose synthase (SuSyMr;MROS_1314) (EC 2.4.1.13) I7A3T6: sucrose synthase (EC 2.4.1.13) from Melioribacter roseus	32% id, 9% cov
SUS5_ARATH / F4K5W8: Sucrose synthase 5; AtSUS5; Sucrose-UDP glucosyltransferase 5; EC 2.4.1.13 from Arabidopsis thaliana SUS5 / F4K5W8: sucrose synthase (EC 2.4.1.13) from Arabidopsis thaliana F4K5W8: sucrose synthase (EC 2.4.1.13) from Arabidopsis thaliana	33% id, 9% cov
More...

PP_5665: putative microcin B17-like protein, McbA family is similar to:	PaperBLAST
BAA08304.1: sucrose-phosphate synthase (Sps1) (EC 2.4.1.13)	61% id, 3% cov

PP_2172: conserved exported protein of unknown function is similar to:	PaperBLAST
BAA08304.1: sucrose-phosphate synthase (Sps1) (EC 2.4.1.13)	70% id, 2% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2478268-2478741 (frame +1) on AE015451 is similar to:	PaperBLAST
BAA08304.1: sucrose-phosphate synthase (Sps1) (EC 2.4.1.13) Also see hits to annotated proteins above	46% id, 5% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory