Searching in Pseudomonas putida KT2440 (Putida)
Found 120 curated entries in PaperBLAST's database that match '2.4.2.2'.
These curated entries have 82 distinct sequences.
Running ublast with E ≤ 0.01
Found 7 relevant proteins in Pseudomonas putida KT2440, or try another query
| PP_5265: Xanthine phosphoribosyltransferase is similar to: | PaperBLAST |
XPT_BACSU / P42085: Xanthine phosphoribosyltransferase; XPRTase; EC 2.4.2.22 from Bacillus subtilis | 75% id, 98% cov |
XPT_ENTFA / Q831Y0: Xanthine phosphoribosyltransferase; XPRTase; EC 2.4.2.22 from Enterococcus faecalis | 57% id, 98% cov |
| PP_0833: queuine tRNA-ribosyltransferase is similar to: | PaperBLAST |
TGT_ECOLI / P0A847: Queuine tRNA-ribosyltransferase; Guanine insertion enzyme; tRNA-guanine transglycosylase; EC 2.4.2.29 from Escherichia coli | 69% id, 99% cov |
Q54177: tRNA-guanosine34 preQ1 transglycosylase (EC 2.4.2.29) from Shigella flexneri | 69% id, 99% cov |
tgt / Q183P1: preQ1 tRNA-ribosyltransferase (EC 2.4.2.29) from Clostridioides difficile | 55% id, 99% cov |
| PP_0624: Uncharacterized protein YfiH is similar to: | PaperBLAST |
PURNU_ECOLI / P33644: Purine nucleoside phosphorylase YfiH; Adenosine deaminase YfiH; Polyphenol oxidase YfiH; S-methyl-5'-thioadenosine phosphorylase YfiH; EC 2.4.2.1; EC 3.5.4.4; EC 1.10.3.-; EC 2.4.2.28 from Escherichia coli | 56% id, 98% cov |
PURNU_GEOS3 / P84138: Purine nucleoside phosphorylase YlmD; Adenosine deaminase YlmD; S-methyl-5'-thioadenosine phosphorylase YlmD; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Geobacillus stearothermophilus | 35% id, 87% cov |
PURNU_BACTN / Q89ZI8: Purine nucleoside phosphorylase BT_4389; Adenosine deaminase BT_4389; S-methyl-5'-thioadenosine phosphorylase BT_4389; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Bacteroides thetaiotaomicron | 31% id, 92% cov |
| PP_1679: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase is similar to: | PaperBLAST |
cobT / A0A0K1TPX5: nicotinate-nucleotide--5-methoxybenzimidazole phosphoribosyltransferase (EC 2.4.2.21) from Moorella thermoacetica | 43% id, 94% cov |
cobT / A0A1D9FP51: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) from Clostridium formicaceticum | 41% id, 96% cov |
COBT_SALTY / Q05603: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; NN:DBI PRT; N(1)-alpha-phosphoribosyltransferase; EC 2.4.2.21 from Salmonella typhimurium | 40% id, 96% cov |
| PP_0747: Hypoxanthine-guanine phosphoribosyltransferase is similar to: | PaperBLAST |
HGXR_TRIFO / P51900: Hypoxanthine-guanine-xanthine phosphoribosyltransferase; HGPRT; HGXPRT; HGXPRTase; EC 2.4.2.22; EC 2.4.2.8 from Tritrichomonas foetus | 32% id, 95% cov |
| PP_3254: putative Nucleosidase is similar to: | PaperBLAST |
Q8YBL1: S-methyl-5'-thioadenosine phosphorylase (EC 2.4.2.28); methylthioadenosine nucleosidase (EC 3.2.2.16) from Brucella melitensis | 33% id, 86% cov |
| PP_1674: 5,6-dimethylbenzimidazole synthase is similar to: | PaperBLAST |
D7GJ95: aerobic 5,6-dimethylbenzimidazole synthase (EC 1.13.11.79); nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) from Propionibacterium freudenreichii | 41% id, 34% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 7 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1868930-1869823 (frame +2) on AE015451 is similar to: | PaperBLAST |
D7GJ95: aerobic 5,6-dimethylbenzimidazole synthase (EC 1.13.11.79); nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) from Propionibacterium freudenreichii | 38% id, 40% cov |
Lawrence Berkeley National Laboratory