Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Pseudomonas putida KT2440 (Putida)

Found 19 curated entries in PaperBLAST's database that match '2.5.1.48' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Pseudomonas putida KT2440, or try another query

PP_2001: O-succinylhomoserine sulfhydrylase is similar to:	PaperBLAST
metZ / P55218: O-succinyl-L-homoserine sulfhydrylase (EC 2.5.1.48) from Pseudomonas aeruginosa	82% id, 100% cov
METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis	39% id, 98% cov
METB_HELPX / Q1M0P5: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Helicobacter pylori Q1M0P5: cystathionine gamma-synthase (EC 2.5.1.48) from Helicobacter pylori	39% id, 95% cov
A0PKT3: cystathionine gamma-synthase (EC 2.5.1.48) from Mycobacterium ulcerans	37% id, 97% cov
H7C6A2: cystathionine gamma-synthase (EC 2.5.1.48) from Corynebacterium glutamicum	37% id, 98% cov
METB_ECOLI / P00935: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Escherichia coli MetB / b3939: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli metB / P00935: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli	37% id, 97% cov
Ac3H11_2452: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Acidovorax sp.	28% id, 99% cov
L0EKR2: cystathionine gamma-synthase (EC 2.5.1.48) from Lens culinaris	37% id, 68% cov
L0EK12: cystathionine gamma-synthase (EC 2.5.1.48) from Cicer arietinum	35% id, 71% cov
CGS1_ARATH / P55217: Cystathionine gamma-synthase 1, chloroplastic; AtCGS1; METHIONINE OVERACCUMULATION 1; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Arabidopsis thaliana CGS1 / P55217: cystathionine γ-synthase (EC 2.5.1.48) from Arabidopsis thaliana	35% id, 69% cov
HSERO_RS16440: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Herbaspirillum seropedicae	34% id, 55% cov
HSERO_RS16440: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Herbaspirillum seropedicae	41% id, 38% cov
More...

PP_4594: putative Cystathionine gamma-synthase is similar to:	PaperBLAST
METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis	46% id, 96% cov
A0PKT3: cystathionine gamma-synthase (EC 2.5.1.48) from Mycobacterium ulcerans	44% id, 97% cov
METB_HELPX / Q1M0P5: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Helicobacter pylori Q1M0P5: cystathionine gamma-synthase (EC 2.5.1.48) from Helicobacter pylori	42% id, 99% cov
H7C6A2: cystathionine gamma-synthase (EC 2.5.1.48) from Corynebacterium glutamicum	39% id, 100% cov
metZ / P55218: O-succinyl-L-homoserine sulfhydrylase (EC 2.5.1.48) from Pseudomonas aeruginosa	41% id, 96% cov
METB_ECOLI / P00935: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Escherichia coli MetB / b3939: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli metB / P00935: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli	39% id, 99% cov
HSERO_RS16440: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Herbaspirillum seropedicae	32% id, 100% cov
Ac3H11_2452: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Acidovorax sp.	30% id, 99% cov
L0EKR2: cystathionine gamma-synthase (EC 2.5.1.48) from Lens culinaris	39% id, 73% cov
L0EK12: cystathionine gamma-synthase (EC 2.5.1.48) from Cicer arietinum	38% id, 73% cov
CGS1_ARATH / P55217: Cystathionine gamma-synthase 1, chloroplastic; AtCGS1; METHIONINE OVERACCUMULATION 1; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Arabidopsis thaliana CGS1 / P55217: cystathionine γ-synthase (EC 2.5.1.48) from Arabidopsis thaliana	38% id, 72% cov
More...

PP_1308: methionine gamma-lyase is similar to:	PaperBLAST
METB_HELPX / Q1M0P5: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Helicobacter pylori Q1M0P5: cystathionine gamma-synthase (EC 2.5.1.48) from Helicobacter pylori	44% id, 98% cov
H7C6A2: cystathionine gamma-synthase (EC 2.5.1.48) from Corynebacterium glutamicum	43% id, 98% cov
A0PKT3: cystathionine gamma-synthase (EC 2.5.1.48) from Mycobacterium ulcerans	42% id, 100% cov
METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis	42% id, 99% cov
metZ / P55218: O-succinyl-L-homoserine sulfhydrylase (EC 2.5.1.48) from Pseudomonas aeruginosa	41% id, 96% cov
METB_ECOLI / P00935: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Escherichia coli MetB / b3939: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli metB / P00935: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli	39% id, 98% cov
Ac3H11_2452: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Acidovorax sp.	36% id, 98% cov
CGS1_ARATH / P55217: Cystathionine gamma-synthase 1, chloroplastic; AtCGS1; METHIONINE OVERACCUMULATION 1; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Arabidopsis thaliana CGS1 / P55217: cystathionine γ-synthase (EC 2.5.1.48) from Arabidopsis thaliana	38% id, 71% cov
L0EKR2: cystathionine gamma-synthase (EC 2.5.1.48) from Lens culinaris	37% id, 69% cov
L0EK12: cystathionine gamma-synthase (EC 2.5.1.48) from Cicer arietinum	35% id, 72% cov
HSERO_RS16440: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Herbaspirillum seropedicae	37% id, 52% cov
HSERO_RS16440: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Herbaspirillum seropedicae	40% id, 39% cov
More...

PP_0659: Cystathionine gamma-synthase is similar to:	PaperBLAST
METB_HELPX / Q1M0P5: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Helicobacter pylori Q1M0P5: cystathionine gamma-synthase (EC 2.5.1.48) from Helicobacter pylori	40% id, 99% cov
METB_ECOLI / P00935: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Escherichia coli MetB / b3939: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli metB / P00935: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli	40% id, 96% cov
METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis	39% id, 97% cov
A0PKT3: cystathionine gamma-synthase (EC 2.5.1.48) from Mycobacterium ulcerans	37% id, 99% cov
metZ / P55218: O-succinyl-L-homoserine sulfhydrylase (EC 2.5.1.48) from Pseudomonas aeruginosa	42% id, 85% cov
HSERO_RS16440: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Herbaspirillum seropedicae	36% id, 99% cov
H7C6A2: cystathionine gamma-synthase (EC 2.5.1.48) from Corynebacterium glutamicum	36% id, 99% cov
L0EK12: cystathionine gamma-synthase (EC 2.5.1.48) from Cicer arietinum	40% id, 72% cov
L0EKR2: cystathionine gamma-synthase (EC 2.5.1.48) from Lens culinaris	41% id, 69% cov
CGS1_ARATH / P55217: Cystathionine gamma-synthase 1, chloroplastic; AtCGS1; METHIONINE OVERACCUMULATION 1; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Arabidopsis thaliana CGS1 / P55217: cystathionine γ-synthase (EC 2.5.1.48) from Arabidopsis thaliana	41% id, 69% cov
Ac3H11_2452: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Acidovorax sp.	34% id, 51% cov
Ac3H11_2452: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Acidovorax sp.	36% id, 37% cov
More...

PP_2528: O-acetylhomoserine (thiol)-lyase is similar to:	PaperBLAST
HSERO_RS16440: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Herbaspirillum seropedicae	36% id, 93% cov
Ac3H11_2452: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Acidovorax sp.	32% id, 98% cov
METB_ECOLI / P00935: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Escherichia coli MetB / b3939: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli metB / P00935: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli	28% id, 99% cov
metZ / P55218: O-succinyl-L-homoserine sulfhydrylase (EC 2.5.1.48) from Pseudomonas aeruginosa	40% id, 58% cov
METB_HELPX / Q1M0P5: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Helicobacter pylori Q1M0P5: cystathionine gamma-synthase (EC 2.5.1.48) from Helicobacter pylori	41% id, 56% cov
METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis	40% id, 57% cov
A0PKT3: cystathionine gamma-synthase (EC 2.5.1.48) from Mycobacterium ulcerans	37% id, 58% cov
H7C6A2: cystathionine gamma-synthase (EC 2.5.1.48) from Corynebacterium glutamicum	38% id, 55% cov
L0EKR2: cystathionine gamma-synthase (EC 2.5.1.48) from Lens culinaris	26% id, 70% cov
metZ / P55218: O-succinyl-L-homoserine sulfhydrylase (EC 2.5.1.48) from Pseudomonas aeruginosa	44% id, 39% cov
METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis	40% id, 39% cov
A0PKT3: cystathionine gamma-synthase (EC 2.5.1.48) from Mycobacterium ulcerans	40% id, 39% cov
H7C6A2: cystathionine gamma-synthase (EC 2.5.1.48) from Corynebacterium glutamicum	40% id, 39% cov
METB_HELPX / Q1M0P5: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Helicobacter pylori Q1M0P5: cystathionine gamma-synthase (EC 2.5.1.48) from Helicobacter pylori	39% id, 39% cov
L0EK12: cystathionine gamma-synthase (EC 2.5.1.48) from Cicer arietinum	29% id, 53% cov
CGS1_ARATH / P55217: Cystathionine gamma-synthase 1, chloroplastic; AtCGS1; METHIONINE OVERACCUMULATION 1; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Arabidopsis thaliana CGS1 / P55217: cystathionine γ-synthase (EC 2.5.1.48) from Arabidopsis thaliana	31% id, 46% cov
More...

PP_4348: putative Cystathionine beta-lyase is similar to:	PaperBLAST
METB_ECOLI / P00935: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Escherichia coli MetB / b3939: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli metB / P00935: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli	28% id, 92% cov
H7C6A2: cystathionine gamma-synthase (EC 2.5.1.48) from Corynebacterium glutamicum	26% id, 91% cov
A0PKT3: cystathionine gamma-synthase (EC 2.5.1.48) from Mycobacterium ulcerans	26% id, 87% cov
Ac3H11_2452: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Acidovorax sp.	27% id, 44% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory