Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas putida KT2440 (Putida)

Found 97 curated entries in PaperBLAST's database that match '2.6.1.1' as complete word(s).

These curated entries have 72 distinct sequences.

Running ublast with E ≤ 0.01

Found 20 relevant proteins in Pseudomonas putida KT2440, or try another query

PP_3590: D-lysine aminotransferase
is similar to:
PaperBLAST

TYRB_KLEPN / O85746: Tyrosine aminotransferase; TyrAT; Aromatic-amino-acid transaminase; Aspartate aminotransferase; EC 2.6.1.5; EC 2.6.1.57; EC 2.6.1.1 from Klebsiella pneumoniae

71% id,
100% cov

TyrB / b4054: tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.42; EC 2.6.1.1; EC 2.6.1.5; EC 2.6.1.27) from Escherichia coli
tyrB / P04693: tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.1) from Escherichia coli

71% id,
100% cov

phhC / P43336: tyrosine aminotransferase subunit (EC 2.6.1.1) from Pseudomonas aeruginosa

44% id,
98% cov

More...

PP_1972: aromatic-amino-acid aminotransferase
is similar to:
PaperBLAST

TyrB / b4054: tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.42; EC 2.6.1.1; EC 2.6.1.5; EC 2.6.1.27) from Escherichia coli
tyrB / P04693: tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.1) from Escherichia coli

51% id,
100% cov

TYRB_KLEPN / O85746: Tyrosine aminotransferase; TyrAT; Aromatic-amino-acid transaminase; Aspartate aminotransferase; EC 2.6.1.5; EC 2.6.1.57; EC 2.6.1.1 from Klebsiella pneumoniae

50% id,
100% cov

AAT_ECOLI / P00509: Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Escherichia coli
AspC / b0928: aspartate aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.7; EC 2.6.1.3) from Escherichia coli
aspC / P00509: aspartate aminotransferase (EC 2.6.1.1; EC 2.6.1.7; EC 2.6.1.3) from Escherichia coli
P00509: aspartate transaminase (EC 2.6.1.1) from Escherichia coli
A0A140ND68: aspartate transaminase (EC 2.6.1.1) from Escherichia coli
D3H0F7: aspartate transaminase (EC 2.6.1.1) from Escherichia coli
1cq7A / P00509: Aspartate aminotransferase (E.C. 2.6.1.1) complexed with c5-pyridoxal- 5p-phosphate

47% id,
100% cov

More...

PP_0817: aminotransferase
is similar to:
PaperBLAST

Q8YTF2: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

47% id,
97% cov

Q8YUK5: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

37% id,
98% cov

AAT_SYNY3 / Q55128: Aspartate aminotransferase; AAT; AspAT; EC 2.6.1.1 from Synechocystis sp.

34% id,
98% cov

More...

PP_3721: Arginine--pyruvate transaminase AruH
is similar to:
PaperBLAST

AAPAT_THET8 / Q56232: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus
aspC / RF|YP_143312.1: aspartate transaminase; EC 2.6.1.1 from Thermus thermophilus

40% id,
99% cov

aspC / GB|CAA63799.1: aspartate transaminase; EC 2.6.1.1 from Geobacillus stearothermophilus

35% id,
98% cov

AAPAT_CERS1 / A3PMF8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.79 from Cereibacter sphaeroides

36% id,
94% cov

More...

PP_4692: putative aspartate/tyrosine/aromatic aminotransferase
is similar to:
PaperBLAST

AAPAT_THET8 / Q56232: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus
aspC / RF|YP_143312.1: aspartate transaminase; EC 2.6.1.1 from Thermus thermophilus

35% id,
98% cov

AAT_STRAW / Q82DR2: Aspartate aminotransferase; AAT; AspAT; EC 2.6.1.1 from Streptomyces avermitilis

35% id,
96% cov

AAT_THEMA / Q9X0Y2: Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Thermotoga maritima

34% id,
99% cov

More...

PP_1872: glutamate-pyruvate aminotransferase
is similar to:
PaperBLAST

aspC / GB|CAA63799.1: aspartate transaminase; EC 2.6.1.1 from Geobacillus stearothermophilus

33% id,
95% cov

aspB / GB|CAB14153.1: aspartate transaminase; EC 2.6.1.1 from Bacillus subtilis

32% id,
96% cov

AAPAT_CERS1 / A3PMF8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.79 from Cereibacter sphaeroides

30% id,
99% cov

More...

PP_0858: putative methionine/glutamine aminotransferase
is similar to:
PaperBLAST

AAPAT_THET8 / Q56232: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus
aspC / RF|YP_143312.1: aspartate transaminase; EC 2.6.1.1 from Thermus thermophilus

34% id,
90% cov

aspC / GB|CAA63799.1: aspartate transaminase; EC 2.6.1.1 from Geobacillus stearothermophilus

30% id,
96% cov

AAT_THEMA / Q9X0Y2: Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Thermotoga maritima

29% id,
97% cov

More...

PP_3786: aminotransferase
is similar to:
PaperBLAST

Q8YTF2: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

30% id,
93% cov

AAPAT_THET8 / Q56232: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus
aspC / RF|YP_143312.1: aspartate transaminase; EC 2.6.1.1 from Thermus thermophilus

28% id,
88% cov

Q8YUK5: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

25% id,
89% cov

More...

PP_1588: N-succinyl-L,L-diaminopimelate aminotransferase alternative
is similar to:
PaperBLAST

Q8YUK5: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

27% id,
95% cov

AAPAT_THET8 / Q56232: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus
aspC / RF|YP_143312.1: aspartate transaminase; EC 2.6.1.1 from Thermus thermophilus

27% id,
91% cov

AAT_STRAW / Q82DR2: Aspartate aminotransferase; AAT; AspAT; EC 2.6.1.1 from Streptomyces avermitilis

27% id,
91% cov

More...

PP_3750: Transcriptional regulator, GntR family
is similar to:
PaperBLAST

aspC / GB|CAA63799.1: aspartate transaminase; EC 2.6.1.1 from Geobacillus stearothermophilus

25% id,
96% cov

AAT_STRAW / Q82DR2: Aspartate aminotransferase; AAT; AspAT; EC 2.6.1.1 from Streptomyces avermitilis

25% id,
95% cov

aspB / GB|CAB14153.1: aspartate transaminase; EC 2.6.1.1 from Bacillus subtilis

24% id,
96% cov

More...

PP_2209: 2-aminoethylphosphonate--pyruvate transaminase
is similar to:
PaperBLAST

serC / Q58369: phosphoserine aminotransferase monomer (EC 2.6.1.1; EC 2.6.1.52) from Methanocaldococcus jannaschii

26% id,
93% cov

PP_5342: Transcriptional regulator, GntR family
is similar to:
PaperBLAST

Q8YMS6: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

27% id,
82% cov

AAT_SYNY3 / Q55128: Aspartate aminotransferase; AAT; AspAT; EC 2.6.1.1 from Synechocystis sp.

26% id,
85% cov

AAPAT_THET8 / Q56232: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus
aspC / RF|YP_143312.1: aspartate transaminase; EC 2.6.1.1 from Thermus thermophilus

26% id,
81% cov

More...

PP_2542: Transcriptional regulator, GntR family
is similar to:
PaperBLAST

AAT_THEMA / Q9X0Y2: Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Thermotoga maritima

26% id,
82% cov

ArAT1 / D7F4K3: aromatic amino acid transaminase (EC 2.6.1.1; EC 2.6.1.57) from Cucumis melo

21% id,
79% cov

ARO9 / P38840: aromatic amino acid aminotransferase II (EC 2.6.1.1; EC 2.6.1.58; EC 2.6.1.28) from Saccharomyces cerevisiae

20% id,
78% cov

More...

PP_1109: Transcriptional regulator, GntR family
is similar to:
PaperBLAST

AAPAT_THET8 / Q56232: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus
aspC / RF|YP_143312.1: aspartate transaminase; EC 2.6.1.1 from Thermus thermophilus

24% id,
86% cov

ARO9 / P38840: aromatic amino acid aminotransferase II (EC 2.6.1.1; EC 2.6.1.58; EC 2.6.1.28) from Saccharomyces cerevisiae

22% id,
37% cov

PP_5275: putative regulator
is similar to:
PaperBLAST

ARO9 / P38840: aromatic amino acid aminotransferase II (EC 2.6.1.1; EC 2.6.1.58; EC 2.6.1.28) from Saccharomyces cerevisiae

22% id,
83% cov

PAT_ARATH / Q9SIE1: Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase; AtAAT; AtPPA-AT; Protein MATERNAL EFFECT EMBRYO ARREST 17; EC 2.6.1.1; EC 2.6.1.78; EC 2.6.1.79 from Arabidopsis thaliana
Q9SIE1: aspartate transaminase (EC 2.6.1.1); aspartate-prephenate aminotransferase (EC 2.6.1.78); glutamate-prephenate aminotransferase (EC 2.6.1.79) from Arabidopsis thaliana

24% id,
76% cov

atrD / B7STY2: L-tyrosine:2-oxoglutarate aminotransferase (EC 2.6.1.1) from Tapinella panuoides

27% id,
61% cov

More...

PP_4197: Transcriptional regulator, GntR family
is similar to:
PaperBLAST

TAT / P17735: Tyrosine aminotransferase (EC 2.6.1.1) from Homo sapiens

24% id,
67% cov

Tat / P04694: tyrosine aminotransferase subunit (EC 2.6.1.1) from Rattus norvegicus

24% id,
67% cov

ARO9 / P38840: aromatic amino acid aminotransferase II (EC 2.6.1.1; EC 2.6.1.58; EC 2.6.1.28) from Saccharomyces cerevisiae

24% id,
44% cov

PP_1676: subunit of adenosylcobinamide-phosphate synthase beta component
is similar to:
PaperBLAST

AAT_STRAW / Q82DR2: Aspartate aminotransferase; AAT; AspAT; EC 2.6.1.1 from Streptomyces avermitilis

25% id,
58% cov

PP_0486: Transcriptional regulator, GntR family
is similar to:
PaperBLAST

ARO9 / P38840: aromatic amino acid aminotransferase II (EC 2.6.1.1; EC 2.6.1.58; EC 2.6.1.28) from Saccharomyces cerevisiae

22% id,
65% cov

PP_0967: Histidinol-phosphate aminotransferase
is similar to:
PaperBLAST

Q8YUK5: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

26% id,
49% cov

PP_2230: putative K(+)/H(+) antiporter subunit A/B
is similar to:
PaperBLAST

atrD / B7STY2: L-tyrosine:2-oxoglutarate aminotransferase (EC 2.6.1.1) from Tapinella panuoides

30% id,
15% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 19 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2160146-2161072 (frame +2) on AE015451
is similar to:
PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli
ilvE / P0AB80: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

25% id,
90% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory