Searching in Pseudomonas putida KT2440 (Putida)
Found 15 curated entries in PaperBLAST's database that match '2.6.1.27'.
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Pseudomonas putida KT2440, or try another query
| PP_3590: D-lysine aminotransferase is similar to: | PaperBLAST |
TyrB / b4054: tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.42; EC 2.6.1.1; EC 2.6.1.5; EC 2.6.1.27) from Escherichia coli | 71% id, 100% cov |
AspC / b0928: aspartate aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.7; EC 2.6.1.3) from Escherichia coli | 43% id, 100% cov |
| PP_1972: aromatic-amino-acid aminotransferase is similar to: | PaperBLAST |
TyrB / b4054: tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.42; EC 2.6.1.1; EC 2.6.1.5; EC 2.6.1.27) from Escherichia coli | 51% id, 100% cov |
AspC / b0928: aspartate aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.7; EC 2.6.1.3) from Escherichia coli | 47% id, 100% cov |
| PP_2948: Transcriptional regulator, GntR family is similar to: | PaperBLAST |
S4UF58: tryptophan transaminase (EC 2.6.1.27) from Malassezia furfur | 25% id, 81% cov |
| PP_5275: putative regulator is similar to: | PaperBLAST |
A0A0D1E3F3: tryptophan transaminase (EC 2.6.1.27) from Ustilago maydis | 28% id, 53% cov |
| PP_4429: Transcriptional regulator, GntR family is similar to: | PaperBLAST |
S4UF58: tryptophan transaminase (EC 2.6.1.27) from Malassezia furfur | 26% id, 26% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2160146-2161072 (frame +2) on AE015451 is similar to: | PaperBLAST |
IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli | 25% id, 90% cov |
Lawrence Berkeley National Laboratory