Curated BLAST for Genomes


Curated BLAST

Searching in Pseudomonas putida KT2440 (Putida)

Found 114 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 79 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pseudomonas putida KT2440, or try another query

PP_1011: glucokinase
is similar to:

Glk / b2388: glucokinase (EC; EC; EC from Escherichia coli
glk / P0A6V8: glucokinase (EC; EC from Escherichia coli

41% id,
99% cov

PP_0350: Outer membrane ferrichrome-iron receptor
is similar to:

HXK5_ORYSJ / Q5W676: Hexokinase-5; Hexokinase I; EC from Oryza sativa
Q5W676: hexokinase (EC from Oryza sativa

29% id,
18% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory