Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas putida KT2440 (Putida)

Found 20 curated entries in PaperBLAST's database that match '2.7.1.165' as complete word(s).

These curated entries have 10 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pseudomonas putida KT2440, or try another query

PP_3178: glycerate kinase
is similar to:
PaperBLAST

PS417_13970 / A0A1N7UI49: glycerate 2-kinase (EC 2.7.1.165) from Pseudomonas simiae

72% id,
99% cov

YbbZ / b0514: glycerate 2-kinase 2 (EC 2.7.1.165) from Escherichia coli
glxK / P77364: glycerate 2-kinase 2 (EC 2.7.1.165) from Escherichia coli
P77364: glycerate 2-kinase (EC 2.7.1.165) from Escherichia coli

49% id,
97% cov

GLXK1_ECOLI / P23524: Glycerate 2-kinase; Glycerate kinase 1; GK1; EC 2.7.1.165 from Escherichia coli
YhaD / b3124: glycerate 2-kinase 1 (EC 2.7.1.165) from Escherichia coli
garK / P23524: glycerate 2-kinase 1 (EC 2.7.1.165) from Escherichia coli
P23524: glycerate 2-kinase (EC 2.7.1.165) from Escherichia coli

49% id,
94% cov

More...

PP_4300: putative hydroxypyruvate reductase
is similar to:
PaperBLAST

GCK_THEMA / Q9X1S1: D-glycerate 2-kinase; GCK; EC 2.7.1.165 from Thermotoga maritima
Q9X1S1: glycerate 2-kinase (EC 2.7.1.165) from Thermotoga maritima

41% id,
100% cov

GCK_PYRHO / O58231: Glycerate 2-kinase; GCK; 2-phosphoglycerate forming glycerate kinase; EC 2.7.1.165 from Pyrococcus horikoshii
O58231: glycerate 2-kinase (EC 2.7.1.165) from Pyrococcus horikoshii

39% id,
99% cov

Q703V9: glycerate 2-kinase (EC 2.7.1.165) from Thermoproteus tenax

34% id,
95% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory