Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas putida KT2440 (Putida)

Found 29 curated entries in PaperBLAST's database that match '2.7.1.17' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas putida KT2440, or try another query

PP_1075: glycerol kinase
is similar to:
PaperBLAST

Q9WXX1: xylulokinase (EC 2.7.1.17) from Thermotoga maritima

25% id,
99% cov

C7NMH3: xylulokinase (EC 2.7.1.17) from Halorhabdus utahensis

27% id,
90% cov

BT0792: xylulokinase (EC 2.7.1.17) from Bacteroides thetaiotaomicron

24% id,
98% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory