Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas putida KT2440 (Putida)

Found 46 curated entries in PaperBLAST's database that match '2.7.1.4' as complete word(s).

These curated entries have 39 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Pseudomonas putida KT2440, or try another query

PP_3378: putative 2-ketogluconokinase
is similar to:
PaperBLAST

SCRK1_ORYSI / A2WXV8: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

32% id,
98% cov

SCRK1_ORYSJ / Q0JGZ6: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

32% id,
98% cov

N515DRAFT_1919: Fructokinase (EC 2.7.1.4) from Dyella japonica

31% id,
98% cov

More...

PP_2458: ribokinase
is similar to:
PaperBLAST

SCRK1_ORYSI / A2WXV8: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

29% id,
96% cov

SCRK1_ORYSJ / Q0JGZ6: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

29% id,
96% cov

SCRK1_MAIZE / Q6XZ79: Fructokinase-1; ZmFRK1; EC 2.7.1.4 from Zea mays

29% id,
96% cov

More...

PP_0794: 1-phosphofructokinase monomer
is similar to:
PaperBLAST

AO356_00035: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

24% id,
94% cov

Pf6N2E2_1965: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

23% id,
93% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory