Searching in Pseudomonas putida KT2440 (Putida)
Found 13 curated entries in PaperBLAST's database that match '3.1.1.15' as complete word(s).
These curated entries have 11 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Pseudomonas putida KT2440, or try another query
| PP_1170: Gluconolactonase is similar to: | PaperBLAST |
HSERO_RS05225: L-arabinolactonase (EC 3.1.1.15) from Herbaspirillum seropedicae | 34% id, 100% cov |
Ac3H11_615: L-arabinolactonase/D-galactonolactonase (EC 3.1.1.15; EC 3.1.1.25) from Acidovorax sp. | 36% id, 91% cov |
AO356_20235: L-arabinolactonase (EC 3.1.1.15) / D-galactonolactonase (EC 3.1.1.25) from Pseudomonas fluorescens | 33% id, 100% cov |
| PP_3180: Smp-30/Cgr1 family protein is similar to: | PaperBLAST |
PS417_11020: L-arabinolactonase (EC 3.1.1.15) from Pseudomonas simiae | 32% id, 98% cov |
AO356_20235: L-arabinolactonase (EC 3.1.1.15) / D-galactonolactonase (EC 3.1.1.25) from Pseudomonas fluorescens | 32% id, 98% cov |
Pf6N2E2_5966: L-arabinolactonase (EC 3.1.1.15) from Pseudomonas fluorescens | 31% id, 98% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1345188-1346318 (frame -3) on AE015451 is similar to: | PaperBLAST |
Ac3H11_615: L-arabinolactonase/D-galactonolactonase (EC 3.1.1.15; EC 3.1.1.25) from Acidovorax sp. | 36% id, 97% cov |
XACC_HALVD / D4GP31: Pentonolactonase XacC; L-arabinonolactonase; Xylono-1,4-lactonase; EC 3.1.1.15; EC 3.1.1.68 from Haloferax volcanii | 33% id, 98% cov |
Pf1N1B4_413: L-arabinolactonase (EC 3.1.1.15) from Pseudomonas fluorescens | 32% id, 96% cov |
Lawrence Berkeley National Laboratory