Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas putida KT2440 (Putida)

Found 30 curated entries in PaperBLAST's database that match '3.1.3.15' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Pseudomonas putida KT2440, or try another query

PP_5147: Hydrolase, haloacid dehalogenase-like family
is similar to:
PaperBLAST

Psest_3864: Histidinol-phosphatase (EC:3.1.3.15) from Pseudomonas stutzeri

71% id,
100% cov

HIS9_PSEAE / Q9I6F6: Histidinol-phosphatase; Hol-Pase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Pseudomonas aeruginosa

68% id,
100% cov

HP15_461: Histidinol-phosphatase (EC:3.1.3.15) from Marinobacter adhaerens

54% id,
100% cov

More...

PP_3157: Inositol monophosphatase family protein
is similar to:
PaperBLAST

PGA1_c21860: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Phaeobacter inhibens

51% id,
100% cov

Ga0059261_2035: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Sphingomonas koreensis

47% id,
95% cov

AZOBR_RS03845: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Azospirillum brasilense

47% id,
95% cov

More...

PP_1721: putative phosphoserine phosphatase
is similar to:
PaperBLAST

HIS9_PSEAE / Q9I6F6: Histidinol-phosphatase; Hol-Pase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Pseudomonas aeruginosa

45% id,
99% cov

HP15_461: Histidinol-phosphatase (EC:3.1.3.15) from Marinobacter adhaerens

40% id,
99% cov

Psest_3864: Histidinol-phosphatase (EC:3.1.3.15) from Pseudomonas stutzeri

39% id,
99% cov

More...

PP_0838: inositol monophosphatase / glycerol-2-phosphatase
is similar to:
PaperBLAST

PGA1_c21860: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Phaeobacter inhibens

33% id,
98% cov

AZOBR_RS03845: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Azospirillum brasilense

33% id,
97% cov

HISN_CORGL / Q8NS80: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Corynebacterium glutamicum
hisN / Q8NS80: histidinol-phosphatase (EC 3.1.3.15) from Corynebacterium glutamicum
Q8NS80: histidinol-phosphatase (EC 3.1.3.15) from Corynebacterium glutamicum

34% id,
93% cov

More...

PP_0261: adenosine-3'(2'),5'-bisphosphate nucleotidase
is similar to:
PaperBLAST

HISN_MYCTU / P95189: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Mycobacterium tuberculosis
P95189: histidinol-phosphatase (EC 3.1.3.15) from Mycobacterium tuberculosis

31% id,
89% cov

AZOBR_RS03845: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Azospirillum brasilense

33% id,
85% cov

PGA1_c21860: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Phaeobacter inhibens

30% id,
89% cov

More...

PP_4909: phosphoserine phosphatase
is similar to:
PaperBLAST

HIS9_PSEAE / Q9I6F6: Histidinol-phosphatase; Hol-Pase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Pseudomonas aeruginosa

26% id,
95% cov

Psest_3864: Histidinol-phosphatase (EC:3.1.3.15) from Pseudomonas stutzeri

25% id,
95% cov

HP15_461: Histidinol-phosphatase (EC:3.1.3.15) from Marinobacter adhaerens

25% id,
94% cov

PP_0289: Imidazoleglycerol-phosphate dehydratase
is similar to:
PaperBLAST

HIS7_ECO57 / Q9S5G5: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Escherichia coli

45% id,
55% cov

HisB / b2022: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli
hisB / P06987: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli

45% id,
55% cov

HIS7_SPILD / D2QPE6: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Spirosoma linguale

48% id,
52% cov

More...

PP_0059: D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase
is similar to:
PaperBLAST

HIS7_BACTN / Q8ABA7: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Bacteroides thetaiotaomicron

25% id,
46% cov

HIS7_ECO57 / Q9S5G5: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Escherichia coli

28% id,
39% cov

HisB / b2022: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli
hisB / P06987: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli

28% id,
39% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

975326-976183 (frame -1) on AE015451
is similar to:
PaperBLAST

AZOBR_RS03845: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Azospirillum brasilense
Also see hits to annotated proteins above

33% id,
98% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory