Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas putida KT2440 (Putida)

Found 185 curated entries in PaperBLAST's database that match '3.2.1.20' as complete word(s).

These curated entries have 140 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Pseudomonas putida KT2440, or try another query

PP_4059: fused trehalose synthase B/maltokinase
is similar to:
PaperBLAST

Q9Z3R8: alpha-glucosidase (EC 3.2.1.20) from Sinorhizobium meliloti

34% id,
98% cov

Dshi_1649: alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) from Dinoroseobacter shibae

33% id,
94% cov

Psest_0870: Alpha-glucosidase (EC 3.2.1.20) from Pseudomonas stutzeri

33% id,
93% cov

More...

PP_4051: malto-oligosyltrehalose trehalohydrolase
is similar to:
PaperBLAST

BAA12704.1: α-glucosidase / exo-α-1,4-glucosidase (EC 3.2.1.20)

28% id,
33% cov

BAE48285.1: α-glucosidase (Gsj) (EC 3.2.1.20)
Q33E90: alpha-glucosidase (EC 3.2.1.20) from Geobacillus sp.

28% id,
33% cov

CAB46746.1: α-glucosidase (maltase mal22) (EC 3.2.1.20)

29% id,
32% cov

More...

PP_4053: maltooligosyl trehalose synthase
is similar to:
PaperBLAST

MalZ / b0403: maltodextrin glucosidase (EC 3.2.1.20) from Escherichia coli
malZ / P21517: maltodextrin glucosidase (EC 3.2.1.20) from Escherichia coli
P21517: alpha-glucosidase (EC 3.2.1.20) from Escherichia coli

35% id,
20% cov

AIZ92452.1: α-glucosidase Z (EO53_16270;MalZ;b0403) (EC 3.2.1.20)
BAE76183.1: maltodextrin glucosidase (MalZ) (EC 3.2.1.20)

35% id,
20% cov

PP_4060: Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase
is similar to:
PaperBLAST

MAL1_DROME / P07190: Maltase A1; Larval visceral protein H; EC 3.2.1.20 from Drosophila melanogaster
AAF59089.3: α-glucosidase H (LvpH; RE72980p) (EC 3.2.1.20)

24% id,
26% cov

PP_2918: trehalose synthase A
is similar to:
PaperBLAST

BAF44218.1: α-glucosidase I (JBgI) (EC 3.2.1.20)
A1IHL0: alpha-glucosidase (EC 3.2.1.20) from Apis cerana

26% id,
21% cov

PP_4058: 1,4-alpha-glucan branching enzyme
is similar to:
PaperBLAST

Psest_0870: Alpha-glucosidase (EC 3.2.1.20) from Pseudomonas stutzeri

28% id,
18% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory