Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas putida KT2440 (Putida)

Found 16 curated entries in PaperBLAST's database that match '3.5.2.7' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Pseudomonas putida KT2440, or try another query

PP_5030: Imidazolonepropionase
is similar to:
PaperBLAST

hutI / O31200: imidazolonepropionase (EC 3.5.2.7) from Pseudomonas putida

97% id,
100% cov

PfGW456L13_317: Imidazolonepropionase (EC 3.5.2.7) from Pseudomonas fluorescens

84% id,
100% cov

AO356_09595: Imidazolonepropionase (EC 3.5.2.7) from Pseudomonas fluorescens

83% id,
100% cov

More...

PP_3194: conserved protein of unknown function
is similar to:
PaperBLAST

AO356_09595: Imidazolonepropionase (EC 3.5.2.7) from Pseudomonas fluorescens

24% id,
93% cov

Pf6N2E2_3798: Imidazolonepropionase (EC 3.5.2.7) from Pseudomonas fluorescens

24% id,
93% cov

Pf1N1B4_1579: Imidazolonepropionase (EC 3.5.2.7) from Pseudomonas fluorescens

31% id,
25% cov

More...

PP_5252: conserved exported protein of unknown function
is similar to:
PaperBLAST

HUTI_BACSU / P42084: Imidazolonepropionase; Imidazolone-5-propionate hydrolase; EC 3.5.2.7 from Bacillus subtilis
P42084: imidazolonepropionase (EC 3.5.2.7) from Bacillus subtilis

31% id,
24% cov

SO0095: Imidazolonepropionase (EC 3.5.2.7) from Shewanella oneidensis

34% id,
16% cov

SM_b21166: Imidazolonepropionase (EC 3.5.2.7) from Sinorhizobium meliloti

31% id,
14% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory