Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas putida KT2440 (Putida)

Found 12 curated entries in PaperBLAST's database that match '3.5.3.13' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pseudomonas putida KT2440, or try another query

PP_5036: probable formiminoglutamate deiminase
is similar to:
PaperBLAST

hutF / Q4KJP1: formiminoglutamate deiminase subunit (EC 3.5.3.13) from Pseudomonas fluorescens

85% id,
100% cov

Pf1N1B4_1591: Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Pseudomonas fluorescens

84% id,
100% cov

PfGW456L13_330: Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Pseudomonas fluorescens

84% id,
100% cov

More...

PP_4281: guanine deaminase
is similar to:
PaperBLAST

Ac3H11_2549: Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Acidovorax sp.

27% id,
43% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory