Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas putida KT2440 (Putida)

Found 20 curated entries in PaperBLAST's database that match '3.7.1.2' as complete word(s).

These curated entries have 15 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Pseudomonas putida KT2440, or try another query

PP_3205: Fumarylacetoacetate hydrolase family protein
is similar to:
PaperBLAST

Psest_3512: fumarylacetoacetate (FAA) hydrolase (EC 3.7.1.2) from Pseudomonas stutzeri

54% id,
100% cov

SO1670: fumarylacetoacetate hydrolase (EC 3.7.1.2) from Shewanella oneidensis

51% id,
99% cov

PP_4620: Fumarylacetoacetase
is similar to:
PaperBLAST

FAAA_CAEEL / Q94272: Fumarylacetoacetase; FAA; Beta-diketonase; Fumarylacetoacetate hydrolase; EC 3.7.1.2 from Caenorhabditis elegans
Q94272: fumarylacetoacetase (EC 3.7.1.2) from Caenorhabditis elegans

49% id,
98% cov

FAH_ARATH / Q8RW90: Fumarylacetoacetase; Fumarylacetoacetate hydrolase; AtFAH; Protein SHORT-DAY SENSITIVE CELL DEATH 1; EC 3.7.1.2 from Arabidopsis thaliana
Q8RW90: fumarylacetoacetase (EC 3.7.1.2) from Arabidopsis thaliana

47% id,
99% cov

FAAA_HUMAN / P16930: Fumarylacetoacetase; FAA; Beta-diketonase; Fumarylacetoacetate hydrolase; EC 3.7.1.2 from Homo sapiens
FAH / P16930: Fumarylacetoacetase (EC 3.7.1.2) from Homo sapiens
P16930: fumarylacetoacetase (EC 3.7.1.2) from Homo sapiens

48% id,
97% cov

More...

PP_1709: Fumarylacetoacetate hydrolase family protein
is similar to:
PaperBLAST

A0A0M3SVN7: fumarylacetoacetase (EC 3.7.1.2) from Cupriavidus gilardii

47% id,
99% cov

A0A1B0ZSC0: fumarylacetoacetase (EC 3.7.1.2) from Phaeobacter gallaeciensis

37% id,
97% cov

A0A0D5YDA5: fumarylacetoacetase (EC 3.7.1.2) from Acinetobacter baumannii

33% id,
92% cov

More...

PP_5153: putative isomerase/hydrolase
is similar to:
PaperBLAST

A0A0D5YDA5: fumarylacetoacetase (EC 3.7.1.2) from Acinetobacter baumannii

44% id,
93% cov

A0A0M3SVN7: fumarylacetoacetase (EC 3.7.1.2) from Cupriavidus gilardii

39% id,
91% cov

A0A1B0ZSC0: fumarylacetoacetase (EC 3.7.1.2) from Phaeobacter gallaeciensis

34% id,
88% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory