Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas putida KT2440 (Putida)

Found 17 curated entries in PaperBLAST's database that match '3.7.1.3' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Pseudomonas putida KT2440, or try another query

PP_4350: Aminotransferase, class V, NifS/IscS family
is similar to:
PaperBLAST

AO353_05935: Kynureninase (EC 3.7.1.3) from Pseudomonas fluorescens

23% id,
61% cov

RR42_RS15385: Kynureninase (EC 3.7.1.3) from Cupriavidus basilensis

21% id,
48% cov

PP_2209: 2-aminoethylphosphonate--pyruvate transaminase
is similar to:
PaperBLAST

KYNU_PSEFL / P83788: Kynureninase; L-kynurenine hydrolase; EC 3.7.1.3 from Pseudomonas fluorescens
kyn / P83788: kynureninase subunit (EC 3.7.1.3) from Pseudomonas fluorescens

21% id,
60% cov

PfGW456L13_4288: Kynureninase (EC 3.7.1.3) from Pseudomonas fluorescens

24% id,
33% cov

PS417_23650: Kynureninase (EC 3.7.1.3) from Pseudomonas simiae

24% id,
32% cov

More...

PP_2001: O-succinylhomoserine sulfhydrylase
is similar to:
PaperBLAST

RR42_RS15385: Kynureninase (EC 3.7.1.3) from Cupriavidus basilensis

26% id,
45% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory