Searching in Pseudomonas putida KT2440 (Putida)
Found 22 curated entries in PaperBLAST's database that match '4.1.1.18' as complete word(s).
These curated entries have 13 distinct sequences.
Running ublast with E ≤ 0.01
Found 8 relevant proteins in Pseudomonas putida KT2440, or try another query
| PP_4140: lysine decarboxylase is similar to: | PaperBLAST |
LDCA_PSEAE / Q9I2S7: Lysine decarboxylase LdcA; EC 4.1.1.18 from Pseudomonas aeruginosa | 78% id, 100% cov |
LDCC_ECOLI / P52095: Constitutive lysine decarboxylase; LDCC; EC 4.1.1.18 from Escherichia coli | 44% id, 88% cov |
A0A0H3FP92: lysine decarboxylase (EC 4.1.1.18) from Klebsiella aerogenes | 44% id, 88% cov |
| PP_2077: diaminopimelate decarboxylase is similar to: | PaperBLAST |
A0A0H3H393: lysine decarboxylase (EC 4.1.1.18) from Klebsiella oxytoca | 60% id, 94% cov |
| PP_4871: putative lysine decarboxylase family protein is similar to: | PaperBLAST |
A0A2Z4EVE5: lysine decarboxylase (EC 4.1.1.18) from Morus alba | 47% id, 89% cov |
| PP_5227: diaminopimelate decarboxylase is similar to: | PaperBLAST |
A0A0H3H393: lysine decarboxylase (EC 4.1.1.18) from Klebsiella oxytoca | 34% id, 98% cov |
ldc / O50657: L-lysine decarboxylase monomer (EC 4.1.1.18) from Selenomonas ruminantium | 26% id, 95% cov |
| PP_0864: ornithine decarboxylase is similar to: | PaperBLAST |
ldc / O50657: L-lysine decarboxylase monomer (EC 4.1.1.18) from Selenomonas ruminantium | 32% id, 91% cov |
ODC_NICGU / Q9FPK5: Ornithine decarboxylase, chloroplastic; Lysine decarboxylase; EC 4.1.1.17; EC 4.1.1.18 from Nicotiana glutinosa | 31% id, 65% cov |
| PP_2552: DOPA decarboxylase is similar to: | PaperBLAST |
desA / Q9L072: L-lysine decarboxylase (EC 4.1.1.18) from Streptomyces coelicolor | 29% id, 97% cov |
bibA / B6EP92: L-lysine decarboxylase (EC 4.1.1.18) from Aliivibrio salmonicida | 26% id, 77% cov |
| PP_1631: conserved protein of unknown function is similar to: | PaperBLAST |
A0A2Z4EVE5: lysine decarboxylase (EC 4.1.1.18) from Morus alba | 29% id, 84% cov |
| PP_0567: Biosynthetic arginine decarboxylase is similar to: | PaperBLAST |
ldc / O50657: L-lysine decarboxylase monomer (EC 4.1.1.18) from Selenomonas ruminantium | 23% id, 60% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 8 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2364215-2365495 (frame -1) on AE015451 is similar to: | PaperBLAST |
A0A0H3H393: lysine decarboxylase (EC 4.1.1.18) from Klebsiella oxytoca | 58% id, 99% cov |
Lawrence Berkeley National Laboratory