Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas putida KT2440 (Putida)

Found 15 curated entries in PaperBLAST's database that match '4.1.1.43' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 12 relevant proteins in Pseudomonas putida KT2440, or try another query

PP_4402: branched-chain alpha-keto acid dehydrogenase complex, beta subunit
is similar to:
PaperBLAST

ppdcβ / G1UHX5: phenylpyruvate decarboxylase β subunit (EC 4.1.1.43) from Streptomyces virginiae

47% id,
95% cov

PP_0554: Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta
is similar to:
PaperBLAST

ppdcβ / G1UHX5: phenylpyruvate decarboxylase β subunit (EC 4.1.1.43) from Streptomyces virginiae

37% id,
97% cov

PP_4401: branched-chain alpha-keto acid dehydrogenase complex, alpha subunit
is similar to:
PaperBLAST

ppdcα / A0A222AKA3: phenylpyruvate decarboxylase α subunit (EC 4.1.1.43) from Streptomyces virginiae
A0A222AKA3: phenylpyruvate decarboxylase (EC 4.1.1.43) from Streptomyces virginiae

36% id,
90% cov

PP_0555: Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha
is similar to:
PaperBLAST

ppdcα / A0A222AKA3: phenylpyruvate decarboxylase α subunit (EC 4.1.1.43) from Streptomyces virginiae
A0A222AKA3: phenylpyruvate decarboxylase (EC 4.1.1.43) from Streptomyces virginiae

31% id,
83% cov

PP_3723: putative 2-ketoarginine decarboxylase AruI
is similar to:
PaperBLAST

ipdC / P51852: phenylpyruvate decarboxylase (EC 4.1.1.43) from Azospirillum brasilense

27% id,
94% cov

Q2UKV4: phenylpyruvate decarboxylase (EC 4.1.1.43) from Aspergillus oryzae

25% id,
87% cov

PP_4680: acetohydroxybutanoate synthase / acetolactate synthase
is similar to:
PaperBLAST

pdc / Q5NYJ8: phenylpyruvate decarboxylase (EC 4.1.1.43) from Aromatoleum aromaticum

26% id,
96% cov

PP_1157: Acetolactate synthase
is similar to:
PaperBLAST

PDC1_YEAST / P06169: Pyruvate decarboxylase isozyme 1; Thiamine pyrophosphate-dependent 2-oxo-acid decarboxylase; 2ODC; EC 4.1.1.-; EC 4.1.1.43; EC 4.1.1.72; EC 4.1.1.74 from Saccharomyces cerevisiae
PDC1 / P06169: pyruvate decarboxylase (EC 4.1.1.1; EC 4.1.1.80; EC 4.1.1.43; EC 4.1.1.74; EC 4.1.1.72) from Saccharomyces cerevisiae

26% id,
82% cov

Q2UKV4: phenylpyruvate decarboxylase (EC 4.1.1.43) from Aspergillus oryzae

28% id,
59% cov

PDC5_YEAST / P16467: Pyruvate decarboxylase isozyme 2; Thiamine pyrophosphate-dependent 2-oxo-acid decarboxylase; 2ODC; EC 4.1.1.-; EC 4.1.1.43; EC 4.1.1.72; EC 4.1.1.74 from Saccharomyces cerevisiae
PDC5 / P16467: pyruvate decarboxylase 2 monomer (EC 4.1.1.1; EC 4.1.1.43; EC 4.1.1.74; EC 4.1.1.72) from Saccharomyces cerevisiae

30% id,
47% cov

More...

PP_3365: Acetolactate synthase
is similar to:
PaperBLAST

PDC1_YEAST / P06169: Pyruvate decarboxylase isozyme 1; Thiamine pyrophosphate-dependent 2-oxo-acid decarboxylase; 2ODC; EC 4.1.1.-; EC 4.1.1.43; EC 4.1.1.72; EC 4.1.1.74 from Saccharomyces cerevisiae
PDC1 / P06169: pyruvate decarboxylase (EC 4.1.1.1; EC 4.1.1.80; EC 4.1.1.43; EC 4.1.1.74; EC 4.1.1.72) from Saccharomyces cerevisiae

26% id,
82% cov

Q2UKV4: phenylpyruvate decarboxylase (EC 4.1.1.43) from Aspergillus oryzae

28% id,
59% cov

PDC5_YEAST / P16467: Pyruvate decarboxylase isozyme 2; Thiamine pyrophosphate-dependent 2-oxo-acid decarboxylase; 2ODC; EC 4.1.1.-; EC 4.1.1.43; EC 4.1.1.72; EC 4.1.1.74 from Saccharomyces cerevisiae
PDC5 / P16467: pyruvate decarboxylase 2 monomer (EC 4.1.1.1; EC 4.1.1.43; EC 4.1.1.74; EC 4.1.1.72) from Saccharomyces cerevisiae

30% id,
47% cov

More...

PP_1394: putative Acetolactate synthase, large subunit
is similar to:
PaperBLAST

Q2UKV4: phenylpyruvate decarboxylase (EC 4.1.1.43) from Aspergillus oryzae

24% id,
87% cov

ARO10_YEAST / Q06408: Transaminated amino acid decarboxylase; Thiamine diphosphate-dependent phenylpyruvate decarboxylase; PPDC; Thiamine pyrophosphate-dependent 2-oxo-acid decarboxylase; 2ODC; Transaminated branched-chain amino acid decarboxylase; EC 4.1.1.-; EC 4.1.1.43; EC 4.1.1.72; EC 4.1.1.74; EC 4.1.1.80 from Saccharomyces cerevisiae
ARO10 / Q06408: 2-keto-3-methylvalerate decarboxylase subunit (EC 4.1.1.1; EC 4.1.1.74; EC 4.1.1.43; EC 4.1.1.72) from Saccharomyces cerevisiae
Q06408: phenylpyruvate decarboxylase (EC 4.1.1.43) from Saccharomyces cerevisiae

27% id,
22% cov

PP_4297: glyoxylate carboligase
is similar to:
PaperBLAST

PDC6_YEAST / P26263: Pyruvate decarboxylase isozyme 3; Thiamine pyrophosphate-dependent 2-oxo-acid decarboxylase; 2ODC; EC 4.1.1.-; EC 4.1.1.43; EC 4.1.1.72; EC 4.1.1.74 from Saccharomyces cerevisiae
PDC6 / P26263: pyruvate decarboxylase 3 monomer (EC 4.1.1.1; EC 4.1.1.80; EC 4.1.1.43; EC 4.1.1.74; EC 4.1.1.72) from Saccharomyces cerevisiae

22% id,
89% cov

PDC1_YEAST / P06169: Pyruvate decarboxylase isozyme 1; Thiamine pyrophosphate-dependent 2-oxo-acid decarboxylase; 2ODC; EC 4.1.1.-; EC 4.1.1.43; EC 4.1.1.72; EC 4.1.1.74 from Saccharomyces cerevisiae
PDC1 / P06169: pyruvate decarboxylase (EC 4.1.1.1; EC 4.1.1.80; EC 4.1.1.43; EC 4.1.1.74; EC 4.1.1.72) from Saccharomyces cerevisiae

22% id,
82% cov

pdc / Q5NYJ8: phenylpyruvate decarboxylase (EC 4.1.1.43) from Aromatoleum aromaticum

25% id,
54% cov

PP_0527: 1-deoxyxylulose-5-phosphate synthase
is similar to:
PaperBLAST

ppdcα / A0A222AKA3: phenylpyruvate decarboxylase α subunit (EC 4.1.1.43) from Streptomyces virginiae
A0A222AKA3: phenylpyruvate decarboxylase (EC 4.1.1.43) from Streptomyces virginiae

34% id,
22% cov

PP_1246: conserved exported protein of unknown function
is similar to:
PaperBLAST

ppdcα / A0A222AKA3: phenylpyruvate decarboxylase α subunit (EC 4.1.1.43) from Streptomyces virginiae
A0A222AKA3: phenylpyruvate decarboxylase (EC 4.1.1.43) from Streptomyces virginiae

54% id,
10% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory