Searching in Pseudomonas putida KT2440 (Putida)
Found 21 curated entries in PaperBLAST's database that match '4.1.3.39' as complete word(s).
These curated entries have 13 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Pseudomonas putida KT2440, or try another query
| PP_1791: putative Aldolase/synthase is similar to: | PaperBLAST |
HOA_THET8 / Q53WI0: 4-hydroxy-2-oxovalerate aldolase; HOA; 4-hydroxy-2-keto-pentanoic acid aldolase; 4-hydroxy-2-oxohexanoate aldolase; 4-hydroxy-2-oxopentanoate aldolase; EC 4.1.3.39; EC 4.1.3.43 from Thermus thermophilus | 30% id, 95% cov |
HOA_PSESP / Q9KWS0: 4-hydroxy-2-oxovalerate aldolase; HOA; 4-hydroxy-2-keto-pentanoic acid aldolase; 4-hydroxy-2-oxopentanoate aldolase; EC 4.1.3.39 from Pseudomonas sp. | 28% id, 97% cov |
P51017: 4-hydroxy-2-oxovalerate aldolase (EC 4.1.3.39) from Pseudomonas putida | 26% id, 94% cov |
| PP_3394: putative 3-hydroxy-3-methylglutaryl-CoA lyase is similar to: | PaperBLAST |
HOA_ECOLI / P51020: 4-hydroxy-2-oxovalerate aldolase; HOA; 4-hydroxy-2-keto-pentanoic acid aldolase; 4-hydroxy-2-oxopentanoate aldolase; EC 4.1.3.39 from Escherichia coli | 25% id, 86% cov |
xylK / P51019: 4-hydroxy-2-oxovalerate aldolase (EC 4.1.3.39) from Pseudomonas putida | 25% id, 84% cov |
todH / P51018: 4-hydroxy-2-oxovalerate aldolase (EC 4.1.3.39) from Pseudomonas putida | 25% id, 82% cov |
| PP_3540: Hydroxymethylglutaryl-CoA lyase is similar to: | PaperBLAST |
P51017: 4-hydroxy-2-oxovalerate aldolase (EC 4.1.3.39) from Pseudomonas putida | 27% id, 73% cov |
| PP_5346: pyruvate carboxylase subunit B is similar to: | PaperBLAST |
P51017: 4-hydroxy-2-oxovalerate aldolase (EC 4.1.3.39) from Pseudomonas putida | 24% id, 75% cov |
HOA4_PARXL / P51015: 4-hydroxy-2-oxovalerate aldolase 4; HOA 4; 4-hydroxy-2-keto-pentanoic acid aldolase 4; 4-hydroxy-2-oxohexanoate aldolase; 4-hydroxy-2-oxopentanoate aldolase 4; EC 4.1.3.39; EC 4.1.3.43 from Paraburkholderia xenovorans | 22% id, 75% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory