Searching in Pseudomonas putida KT2440 (Putida)
Found 8 curated entries in PaperBLAST's database that match '4.2.1.42' as complete word(s).
These curated entries have 5 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Pseudomonas putida KT2440, or try another query
| PP_3601: galactarate dehydratase is similar to: | PaperBLAST |
PS417_04210: Galactarate dehydratase (EC 4.2.1.42) from Pseudomonas simiae | 84% id, 100% cov |
HSERO_RS15800: Galactarate dehydratase (EC 4.2.1.42) from Herbaspirillum seropedicae | 66% id, 99% cov |
GARD_ECOLI / P39829: Galactarate dehydratase (L-threo-forming); GalcD; EC 4.2.1.42 from Escherichia coli | 59% id, 99% cov |
| PP_2834: Putative D-galactarate dehydratase/Altronate dehydratase is similar to: | PaperBLAST |
PS417_04210: Galactarate dehydratase (EC 4.2.1.42) from Pseudomonas simiae | 37% id, 100% cov |
GARD_ECOLI / P39829: Galactarate dehydratase (L-threo-forming); GalcD; EC 4.2.1.42 from Escherichia coli | 38% id, 97% cov |
HSERO_RS15800: Galactarate dehydratase (EC 4.2.1.42) from Herbaspirillum seropedicae | 36% id, 96% cov |
| PP_3715: Muconate cycloisomerase 1 is similar to: | PaperBLAST |
Q8EMJ9: galactarate dehydratase (D-threo-forming) (EC 4.2.1.158); galactarate dehydratase (EC 4.2.1.42) from Oceanobacillus iheyensis | 27% id, 91% cov |
| PP_2831: L-fuconate dehydratase is similar to: | PaperBLAST |
TAGAD_SALTY / Q8ZL58: L-talarate/galactarate dehydratase; TalrD/GalrD; StTGD; EC 4.2.1.156; EC 4.2.1.42 from Salmonella typhimurium | 31% id, 58% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory