Searching in Pseudomonas putida KT2440 (Putida)
Found 12 curated entries in PaperBLAST's database that match '4.2.1.43' as complete word(s).
These curated entries have 11 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Pseudomonas putida KT2440, or try another query
| PP_2036: putative 4-hydroxy-tetrahydrodipicolinate synthase is similar to: | PaperBLAST |
Ac3H11_603: L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) from Acidovorax sp. | 36% id, 86% cov |
HSERO_RS06870: L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) from Herbaspirillum seropedicae | 32% id, 94% cov |
BPHYT_RS22715: L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) from Burkholderia phytofirmans | 33% id, 92% cov |
| PP_1237: 4-hydroxy-tetrahydrodipicolinate synthase is similar to: | PaperBLAST |
HSERO_RS06870: L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) from Herbaspirillum seropedicae | 25% id, 90% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory