Curated BLAST for Genomes


Curated BLAST

Searching in Pseudomonas putida KT2440 (Putida)

Found 33 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 27 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pseudomonas putida KT2440, or try another query

PP_1769: chorismate mutase/Prephenate dehydratase
is similar to:

CMPDT_STUST / P27603: Bifunctional chorismate mutase/prephenate dehydratase; Chorismate mutase-prephenate dehydratase; P-protein; EC; EC from Stutzerimonas stutzeri

87% id,
100% cov

Q8DUV6: prephenate dehydratase (EC from Streptococcus mutans

38% id,
98% cov

PHEA_METJA / Q58054: Prephenate dehydratase; PDT; MjPDT; EC from Methanocaldococcus jannaschii

37% id,
97% cov


PP_0657: putative Amino acid ABC transporter, periplasmic amino acid-binding protein
is similar to:

PHEC_PSEAE / Q01269: Cyclohexadienyl dehydratase; EC; EC from Pseudomonas aeruginosa

24% id,
73% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory