Curated BLAST
Searching in Pseudomonas putida KT2440 (Putida)
Found 14 curated entries in PaperBLAST's database that match '4.2.3.4' as complete word(s).
These curated entries have 9 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Pseudomonas putida KT2440, or try another query
PP_5078: 3-dehydroquinate synthase is similar to: | PaperBLAST |
AROB_ECOLI / P07639: 3-dehydroquinate synthase; DHQS; EC 4.2.3.4 from Escherichia coli AroB / b3389: 3-dehydroquinate synthase (EC 4.2.3.4) from Escherichia coli aroB / P07639: 3-dehydroquinate synthase (EC 4.2.3.4) from Escherichia coli P07639: 3-dehydroquinate synthase (EC 4.2.3.4) from Escherichia coli | 59% id, 97% cov |
DHQS_SOLLC / Q8RU74: 3-dehydroquinate synthase, chloroplastic; EC 4.2.3.4 from Solanum lycopersicum | 63% id, 81% cov |
DHQS_ACTCC / U3KRF2: 3-dehydroquinate synthase, chloroplastic; EC 4.2.3.4 from Actinidia chinensis | 62% id, 80% cov |
Q3M4V2: 3-dehydroquinate synthase (EC 4.2.3.4) from Trichormus variabilis | 46% id, 99% cov |
AROB_HELPY / P56081: 3-dehydroquinate synthase; DHQS; EC 4.2.3.4 from Helicobacter pylori | 41% id, 99% cov |
P9WPX9: 3-dehydroquinate synthase (EC 4.2.3.4) from Mycobacterium tuberculosis | 46% id, 88% cov |
Q8U0A8: 3-dehydroquinate synthase (EC 4.2.3.4) from Pyrococcus furiosus | 39% id, 98% cov |
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans aromA: pentafunctional AROM polypeptide; EC 1.1.1.25; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 4.2.3.4 from Emericella nidulans | 39% id, 21% cov |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae ARO1 / P08566: pentafunctional AROM polypeptide (EC 4.2.3.4; EC 1.1.1.25; EC 2.7.1.71; EC 2.5.1.19; EC 4.2.1.10) from Saccharomyces cerevisiae | 42% id, 12% cov |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae ARO1 / P08566: pentafunctional AROM polypeptide (EC 4.2.3.4; EC 1.1.1.25; EC 2.7.1.71; EC 2.5.1.19; EC 4.2.1.10) from Saccharomyces cerevisiae | 32% id, 10% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory