Searching in Pseudomonas putida KT2440 (Putida)
Found 9 curated entries in PaperBLAST's database that match '4.3.1.12' as complete word(s).
These curated entries have 6 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Pseudomonas putida KT2440, or try another query
| PP_3533: putative ornithine cyclodeaminase is similar to: | PaperBLAST |
OCD_PSEPK / Q88H32: Ornithine cyclodeaminase; OCD; EC 4.3.1.12 from Pseudomonas putida | 100% id, 100% cov |
OCD_AGRFC / P09773: Ornithine cyclodeaminase; OCD; EC 4.3.1.12 from Agrobacterium fabrum | 56% id, 96% cov |
arcB / J7SH14: ornithine cyclodeaminase subunit (EC 4.3.1.12) from Clostridium sporogenes | 55% id, 99% cov |
| PP_4431: Ornithine cyclodeaminase 1 is similar to: | PaperBLAST |
arcB / J7SH14: ornithine cyclodeaminase subunit (EC 4.3.1.12) from Clostridium sporogenes | 28% id, 79% cov |
OCD_AGRFC / P09773: Ornithine cyclodeaminase; OCD; EC 4.3.1.12 from Agrobacterium fabrum | 30% id, 72% cov |
OCD_AGRT4 / Q59701: Ornithine cyclodeaminase; OCD; EC 4.3.1.12 from Agrobacterium tumefaciens | 32% id, 61% cov |
| PP_3190: Ornithine cyclodeaminase/mu-crystallin family protein is similar to: | PaperBLAST |
OCD_PSEPK / Q88H32: Ornithine cyclodeaminase; OCD; EC 4.3.1.12 from Pseudomonas putida | 26% id, 83% cov |
OCD_AGRFC / P09773: Ornithine cyclodeaminase; OCD; EC 4.3.1.12 from Agrobacterium fabrum | 26% id, 81% cov |
OCD_AGRT4 / Q59701: Ornithine cyclodeaminase; OCD; EC 4.3.1.12 from Agrobacterium tumefaciens | 29% id, 73% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory